RNA–Protein interactions for RNA: ENST00000492706.5

TRO-224, Transcript of trophinin, humanhuman

TSL 2

Gene TRO, Length 3,677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-224ENST00000492706 LMCD1Q9NZU5 365 aa13.22□□□□□ -0.29
TRO-224ENST00000492706 LGR5O75473 907 aa13.21□□□□□ -0.29
TRO-224ENST00000492706 UPP2O95045 317 aa13.21□□□□□ -0.29
TRO-224ENST00000492706 PECAM1P16284 738 aaPredicted RBP13.21□□□□□ -0.29
TRO-224ENST00000492706 TROAPQ12815 778 aa13.21□□□□□ -0.29
TRO-224ENST00000492706 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
TRO-224ENST00000492706 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
TRO-224ENST00000492706 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
TRO-224ENST00000492706 NAT10Q9H0A0 1025 aaKnown RBP13.21□□□□□ -0.29
TRO-224ENST00000492706 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
TRO-224ENST00000492706 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.3
TRO-224ENST00000492706 FAM163BP0C2L3 166 aa13.21□□□□□ -0.3
TRO-224ENST00000492706 PYGBP11216 843 aa13.21□□□□□ -0.3
TRO-224ENST00000492706 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.3
TRO-224ENST00000492706 GOLGA1Q92805 767 aa13.21□□□□□ -0.3
TRO-224ENST00000492706 TBC1D31Q96DN5 1066 aa13.21□□□□□ -0.3
TRO-224ENST00000492706 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.3
TRO-224ENST00000492706 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 TMEM47Q9BQJ4 181 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 LLPHQ9BRT6 129 aaKnown RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 KLC4Q9NSK0 619 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 ATP2C2O75185 946 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 RTN2O75298 545 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 LMOD1P29536 600 aaPredicted RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 TNNI2P48788 182 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 TNFAIP1Q13829 316 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 NTRK3Q16288 839 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 CERKLQ49MI3 558 aaPredicted RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRO-224ENST00000492706 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
TRO-224ENST00000492706 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 GDF11O95390 407 aa13.2□□□□□ -0.3
TRO-224ENST00000492706 PPFIA2O75334 1257 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
TRO-224ENST00000492706 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 RCAN1P53805 252 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 FANCBQ8NB91 859 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 LMBR1Q8WVP7 490 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CCDC151A5D8V7 595 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 FANCGO15287 622 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 ERLIN1O75477 346 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 LAMB3Q13751 1172 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CASP8Q14790 479 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 SYNE3Q6ZMZ3 975 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CCDC17Q96LX7 622 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 TACO1Q9BSH4 297 aaKnown RBP13.19□□□□□ -0.3
TRO-224ENST00000492706 TBC1D12O60347 775 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 NR1I2O75469 434 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 TPP2P29144 1249 aaPredicted RBP13.19□□□□□ -0.3
TRO-224ENST00000492706 TXLNAP40222 546 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CCDC178Q5BJE1 867 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
TRO-224ENST00000492706 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
TRO-224ENST00000492706 POTECB2RU33 542 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 MAP2K7O14733 419 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 DDAH1O94760 285 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 SCNN1BP51168 640 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 RTN1Q16799 776 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 B4GALNT2Q8NHY0 566 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 WDR24Q96S15 920 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 TSGA10Q9BZW7 698 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 MAF1Q9H063 256 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
TRO-224ENST00000492706 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 RAB27AP51159 221 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 NBPF12Q5TAG4 269 aaPredicted RBP13.18□□□□□ -0.3
TRO-224ENST00000492706 CEP112Q8N8E3 955 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 FAM71BQ8TC56 605 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 TMCO5BA8MYB1 307 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 MAFGO15525 162 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
TRO-224ENST00000492706 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 SIAH1Q8IUQ4 282 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
TRO-224ENST00000492706 PHKBQ93100 1093 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 DHX58Q96C10 678 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 YIPF2Q9BWQ6 316 aa13.18□□□□□ -0.3
TRO-224ENST00000492706 SEPT2Q15019 361 aa13.17□□□□□ -0.3
TRO-224ENST00000492706 PDCD2Q16342 344 aaPredicted RBP13.17□□□□□ -0.3
TRO-224ENST00000492706 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
TRO-224ENST00000492706 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
TRO-224ENST00000492706 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms