RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 MAP3K20Q9NYL2 800 aaKnown RBP20.46■□□□□ 0.87
LMNB1-206ENST00000492190 GNEQ9Y223 722 aaKnown RBP20.46■□□□□ 0.87
LMNB1-206ENST00000492190 V9GY48 417 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-206ENST00000492190 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 GCOM1H8Y6P7 765 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 CTAGE5O15320 804 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 POLR2MP0CAP2 368 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 EIF2AK2P19525 551 aaKnown RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 CCT2P78371 535 aaKnown RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 TNFAIP2Q03169 654 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 PPP2R5BQ15173 497 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 SAMD3Q8N6K7 520 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 KLHDC9Q8NEP7 349 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 IL31RAQ8NI17 732 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 UPF3AQ9H1J1 476 aaKnown RBP20.45■□□□□ 0.86
LMNB1-206ENST00000492190 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
LMNB1-206ENST00000492190 MEIS2O14770 477 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 EIF5BO60841 1220 aaKnown RBP20.44■□□□□ 0.86
LMNB1-206ENST00000492190 IQSEC1Q6DN90 963 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 CCSAPQ6IQ19 270 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-206ENST00000492190 USP17L6PQ6QN14 398 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 HEATR3Q7Z4Q2 680 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 FCHSD1Q86WN1 690 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 PDCD2LQ9BRP1 358 aa20.44■□□□□ 0.86
LMNB1-206ENST00000492190 ALDH8A1Q9H2A2 487 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-206ENST00000492190 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 NR3C2P08235 984 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 GJA9P57773 515 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 ARHGEF16Q5VV41 709 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 ZNF274Q96GC6 653 aaPredicted RBP20.43■□□□□ 0.86
LMNB1-206ENST00000492190 IWS1Q96ST2 819 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 HTATIP2Q9BUP3 242 aa20.43■□□□□ 0.86
LMNB1-206ENST00000492190 SENP6Q9GZR1 1112 aaPredicted RBP20.43■□□□□ 0.86
LMNB1-206ENST00000492190 CCDC196A0A1B0GTZ2 297 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 KBTBD13C9JR72 458 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 STXBP3O00186 592 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 ARIH2O95376 493 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 PKN1Q16512 942 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 LRRC26Q2I0M4 334 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 PHKBQ93100 1093 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 FERMT2Q96AC1 680 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 WDR11Q9BZH6 1224 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 PHF24Q9UPV7 400 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 FRMPD4Q14CM0 1322 aa20.42■□□□□ 0.86
LMNB1-206ENST00000492190 RANBP2P49792 3224 aaKnown RBP20.42■□□□□ 0.86
LMNB1-206ENST00000492190 PIK3CDO00329 1044 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 RGS20O76081 388 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 C6orf222P0C671 652 aaPredicted RBP20.41■□□□□ 0.86
LMNB1-206ENST00000492190 CST5P28325 142 aaPredicted RBP20.41■□□□□ 0.86
LMNB1-206ENST00000492190 AK2P54819 239 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 NKX3-2P78367 333 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 PGM5Q15124 567 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 STXBP2Q15833 593 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 UBE2SQ16763 222 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 DUSP28Q4G0W2 176 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 NOL8Q76FK4 1167 aaKnown RBP20.41■□□□□ 0.86
LMNB1-206ENST00000492190 RNF180Q86T96 592 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 TLK2Q86UE8 772 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 DPF3Q92784 378 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 ZFP91Q96JP5 570 aaPredicted RBP20.41■□□□□ 0.86
LMNB1-206ENST00000492190 MPHOSPH6Q99547 160 aaKnown RBP20.41■□□□□ 0.86
LMNB1-206ENST00000492190 KIF2CQ99661 725 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 TPCN1Q9ULQ1 816 aa20.41■□□□□ 0.86
LMNB1-206ENST00000492190 B4DLN1 442 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 DYNC1LI2O43237 492 aaPredicted RBP20.4■□□□□ 0.86
LMNB1-206ENST00000492190 PRPF3O43395 683 aaKnown RBP20.4■□□□□ 0.86
LMNB1-206ENST00000492190 IFNAR1P17181 557 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 MRPL12P52815 198 aaKnown RBP20.4■□□□□ 0.86
LMNB1-206ENST00000492190 BEX3Q00994 111 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 STK3Q13188 491 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 KCNA10Q16322 511 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 PFKFB3Q16875 520 aaPredicted RBP20.4■□□□□ 0.86
LMNB1-206ENST00000492190 CCDC62Q6P9F0 684 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 VSIG10LQ86VR7 867 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 SCFD2Q8WU76 684 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 COPS5Q92905 334 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 BARHL2Q9NY43 387 aa20.4■□□□□ 0.86
LMNB1-206ENST00000492190 ADAMTS3O15072 1205 aa20.39■□□□□ 0.85
LMNB1-206ENST00000492190 MYCLP12524 364 aaPredicted RBP20.39■□□□□ 0.85
LMNB1-206ENST00000492190 ATN1P54259 1190 aaPredicted RBP20.39■□□□□ 0.85
LMNB1-206ENST00000492190 NAPAP54920 295 aa20.39■□□□□ 0.85
LMNB1-206ENST00000492190 SEPT14Q6ZU15 432 aa20.39■□□□□ 0.85
LMNB1-206ENST00000492190 SMARCC2Q8TAQ2 1214 aa20.39■□□□□ 0.85
LMNB1-206ENST00000492190 TSEN34Q9BSV6 310 aaKnown RBP20.39■□□□□ 0.85
LMNB1-206ENST00000492190 SCN10AQ9Y5Y9 1956 aa20.39■□□□□ 0.85
LMNB1-206ENST00000492190 A0A1W2PQ45 241 aaPredicted RBP20.38■□□□□ 0.85
LMNB1-206ENST00000492190 A0A1W2PQY0 241 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 EIF3JO75822 258 aaKnown RBP20.38■□□□□ 0.85
LMNB1-206ENST00000492190 SCG2P13521 617 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 NEK4P51957 841 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 ACLYP53396 1101 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 MRPS9P82933 396 aaKnown RBP20.38■□□□□ 0.85
LMNB1-206ENST00000492190 GNASQ5JWF2 1037 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 CUL5Q93034 780 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 PCDH10Q9P2E7 1040 aa20.38■□□□□ 0.85
LMNB1-206ENST00000492190 Q9Y3F1 56 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms