RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ADORA2AP29274 412 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 PWP2Q15269 919 aaKnown RBP21.25■□□□□ 0.99
MCF2L-230ENST00000491028 RILPL1Q5EBL4 403 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 TBCKQ8TEA7 893 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 SOCS4Q8WXH5 440 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 RMDN3Q96TC7 470 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 ZSWIM8A7E2V4 1837 aa21.25■□□□□ 0.99
MCF2L-230ENST00000491028 FAM205CA6NFA0 338 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 INF2Q27J81 1249 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 MORN1Q5T089 497 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 ARHGEF16Q5VV41 709 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 NEK8Q86SG6 692 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 NSUN6Q8TEA1 469 aaKnown RBP21.24■□□□□ 0.99
MCF2L-230ENST00000491028 NAP1L4Q99733 375 aaKnown RBP21.24■□□□□ 0.99
MCF2L-230ENST00000491028 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 SLC5A4Q9NY91 659 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 LRRC37A2A6NM11 1700 aa21.24■□□□□ 0.99
MCF2L-230ENST00000491028 B4DLN1 442 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 PSMC4P43686 418 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 ALDH5A1P51649 535 aaPredicted RBP21.23■□□□□ 0.99
MCF2L-230ENST00000491028 ARHGAP4P98171 946 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 XRRA1Q6P2D8 792 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 CRYGNQ8WXF5 182 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 ERO1AQ96HE7 468 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 MPHOSPH6Q99547 160 aaKnown RBP21.23■□□□□ 0.99
MCF2L-230ENST00000491028 NUDT12Q9BQG2 462 aa21.23■□□□□ 0.99
MCF2L-230ENST00000491028 DIS3Q9Y2L1 958 aaKnown RBP21.23■□□□□ 0.99
MCF2L-230ENST00000491028 FKTNO75072 461 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 PGK2P07205 417 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 CYP3A4P08684 503 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 EIF2AK2P19525 551 aaKnown RBP21.22■□□□□ 0.99
MCF2L-230ENST00000491028 USP11P51784 963 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 MAP2K5Q13163 448 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 ORC2Q13416 577 aaPredicted RBP21.22■□□□□ 0.99
MCF2L-230ENST00000491028 PGM5Q15124 567 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 ZNF792Q3KQV3 632 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 ATL3Q6DD88 541 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 MOXD1Q6UVY6 613 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 ZNF467Q7Z7K2 595 aaPredicted RBP21.22■□□□□ 0.99
MCF2L-230ENST00000491028 IWS1Q96ST2 819 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 PDCD2LQ9BRP1 358 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 CASP8AP2Q9UKL3 1982 aa21.22■□□□□ 0.99
MCF2L-230ENST00000491028 SOWAHBA6NEL2 793 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 HOXC6P09630 235 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 GCFC2P16383 781 aaKnown RBP21.21■□□□□ 0.99
MCF2L-230ENST00000491028 CTGFP29279 349 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 ARHGEF6Q15052 776 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 PCNX4Q63HM2 1172 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 DPP9Q86TI2 863 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 USP6NLQ92738 828 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 TRIM47Q96LD4 638 aa21.21■□□□□ 0.99
MCF2L-230ENST00000491028 ZNF396Q96N95 335 aaPredicted RBP21.21■□□□□ 0.99
MCF2L-230ENST00000491028 PURBQ96QR8 312 aaKnown RBP21.21■□□□□ 0.99
MCF2L-230ENST00000491028 COBLO75128 1261 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 GNRH1P01148 92 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 EDNRBP24530 442 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 CIITAP33076 1130 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 RGS2P41220 211 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 TTC38Q5R3I4 469 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 FAM173BQ6P4H8 233 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 CD99L2Q8TCZ2 262 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 FGD4Q96M96 766 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 ARHGAP39Q9C0H5 1083 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 DOCK3Q8IZD9 2030 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 ASTN1O14525 1302 aa21.2■□□□□ 0.98
MCF2L-230ENST00000491028 ASB14A6NK59 587 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 STAM2O75886 525 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 NR3C2P08235 984 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 CCND2P30279 289 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 TOB1P50616 345 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-230ENST00000491028 UBXN2AP68543 259 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 LETM2Q2VYF4 491 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 PPP4R3AQ6IN85 833 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 ZNF296Q8WUU4 475 aaPredicted RBP21.19■□□□□ 0.98
MCF2L-230ENST00000491028 TNPO1Q92973 898 aaKnown RBP21.19■□□□□ 0.98
MCF2L-230ENST00000491028 APBA2Q99767 749 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 GJD2Q9UKL4 321 aa21.19■□□□□ 0.98
MCF2L-230ENST00000491028 ECM2O94769 699 aaPredicted RBP21.18■□□□□ 0.98
MCF2L-230ENST00000491028 HOXD10P28358 340 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 VSIG10LQ86VR7 867 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 MSL3Q8N5Y2 521 aaKnown RBP21.18■□□□□ 0.98
MCF2L-230ENST00000491028 IL31RAQ8NI17 732 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 MORC4Q8TE76 937 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 MAML3Q96JK9 1138 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 CFAP45Q9UL16 551 aa21.18■□□□□ 0.98
MCF2L-230ENST00000491028 CYP3A7-CYP3A51PA0A087WV96 503 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 EDIL3O43854 480 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 CCNT1O60563 726 aaKnown RBP21.17■□□□□ 0.98
MCF2L-230ENST00000491028 BMP15O95972 392 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 ATP2B1P20020 1258 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 CYP3A7P24462 503 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 ZNF76P36508 570 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 KRT85P78386 507 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 NPLOC4Q8TAT6 608 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 MBOAT7Q96N66 472 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 USP28Q96RU2 1077 aa21.17■□□□□ 0.98
MCF2L-230ENST00000491028 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.17■□□□□ 0.98
MCF2L-230ENST00000491028 POLR3EQ9NVU0 708 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms