RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 RAD50Q92878 1312 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 BRWD1Q9NSI6 2320 aa18.12■□□□□ 0.49
SCAMP3-208ENST00000490999 BAIAP3O94812 1187 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 ARIH2O95376 493 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 PDE4DQ08499 809 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 BFSP2Q13515 415 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 SYDE2Q5VT97 1194 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 GPCPD1Q9NPB8 672 aa18.11■□□□□ 0.49
SCAMP3-208ENST00000490999 RANBP6O60518 1105 aaKnown RBP18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 GPR37L1O60883 481 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 GPNMBQ14956 572 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 PTGISQ16647 500 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 FAM117BQ6P1L5 589 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 CTAGE1Q96RT6 745 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 ZBED2Q9BTP6 218 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 FSD1Q9BTV5 496 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 ARIH1Q9Y4X5 557 aaPredicted RBP18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
SCAMP3-208ENST00000490999 A6NJR5 290 aa18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 TXNP10599 105 aaKnown RBP18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 GDF6Q6KF10 455 aaPredicted RBP18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 RNF207Q6ZRF8 634 aa18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 SCFD2Q8WU76 684 aa18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 DHX38Q92620 1227 aaKnown RBP18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 UBE2ZQ9H832 354 aaPredicted RBP18.09■□□□□ 0.49
SCAMP3-208ENST00000490999 KCNA5P22460 613 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 EDNRBP24530 442 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 RPS6P62753 249 aaKnown RBP18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 PPP4R3BQ5MIZ7 849 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 ZMYM1Q5SVZ6 1142 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 LRRC8DQ7L1W4 858 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 ALYREFQ86V81 257 aaKnown RBP18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 SUGCTQ9HAC7 445 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 WDFY4Q6ZS81 3184 aa18.08■□□□□ 0.48
SCAMP3-208ENST00000490999 PI4K2BG5E9Z4 385 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 IL9P15248 144 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 TOMM22Q9NS69 142 aa18.07■□□□□ 0.48
SCAMP3-208ENST00000490999 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 NBNO60934 754 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 MMP3P08254 477 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 SELPP16109 830 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 SSTR3P32745 418 aaPredicted RBP18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 LRRFIP1Q32MZ4 808 aaKnown RBP18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 USH1GQ495M9 461 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 RRP12Q5JTH9 1297 aaKnown RBP18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 CCDC155Q8N6L0 562 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 UIMC1Q96RL1 719 aa18.06■□□□□ 0.48
SCAMP3-208ENST00000490999 LOC102724159A0A0B4J2E5 919 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 KPNA6O60684 536 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 GJB5O95377 273 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 PWP2Q15269 919 aaKnown RBP18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 GJD3Q8N144 294 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 KAT2BQ92831 832 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 CHMP4BQ9H444 224 aaKnown RBP18.05■□□□□ 0.48
SCAMP3-208ENST00000490999 NOVP48745 357 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 LY6KQ17RY6 165 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 WNT8BQ93098 351 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 MPHOSPH6Q99547 160 aaKnown RBP18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 CPVLQ9H3G5 476 aa18.04■□□□□ 0.48
SCAMP3-208ENST00000490999 PRR33A8MZF0 331 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 CXCL10P02778 98 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 PDHBP11177 359 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 TOP1P11387 765 aaKnown RBP18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 CKBP12277 381 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 ERVK-21P61565 698 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 LEXMQ3ZCV2 418 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 FAM178BQ8IXR5 827 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 RAD9AQ99638 391 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 DCTPP1Q9H773 170 aa18.03■□□□□ 0.48
SCAMP3-208ENST00000490999 H3BQ06 376 aaPredicted RBP18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 ORC4O43929 436 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 MBTPS1Q14703 1052 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 PTCRAQ6ISU1 281 aaPredicted RBP18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 CCDC62Q6P9F0 684 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 DNERQ8NFT8 737 aa18.02■□□□□ 0.48
SCAMP3-208ENST00000490999 ALG1Q9BT22 464 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms