RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 CYB5R4Q7L1T6 521 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 FAM126BQ8IXS8 530 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 UPF3AQ9H1J1 476 aaKnown RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 TBX21Q9UL17 535 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 B4GALT4O60513 344 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 CABYRO75952 493 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 GSPT1P15170 499 aaKnown RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 DNAJB2P25686 324 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 CST5P28325 142 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 HOXA13P31271 388 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 CCDC85BQ15834 202 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 SKAP1Q86WV1 359 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 RAB11FIP4Q86YS3 637 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 MICALL1Q8N3F8 863 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 ALG1Q9BT22 464 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 TTYH1Q9H313 450 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-207ENST00000490903 CNNM2Q9H8M5 875 aa6.3□□□□□ -1.4
CKAP2-207ENST00000490903 PARP14Q460N5 1801 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CPT1AP50416 773 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 NBPF20Q3BBV1 942 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 C16orf59Q7L2K0 433 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MAFAQ8NHW3 353 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 SCFD2Q8WU76 684 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MRPL11Q9Y3B7 192 aaKnown RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 GRIN2DO15399 1336 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 GREB1LQ9C091 1923 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CHMLP26374 656 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 NOVP48745 357 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 RABGGTBP53611 331 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 ASPRV1Q53RT3 343 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 TIFAQ96CG3 184 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MTG1Q9BT17 334 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 ALDH8A1Q9H2A2 487 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 PRDM12Q9H4Q4 367 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 ZNF576Q9H609 170 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 POLR3EQ9NVU0 708 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 TTC28Q96AY4 2481 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 FRMPD3Q5JV73 1810 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 ZNF236Q9UL36 1845 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 ARIH2O95376 493 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CYP21A2P08686 494 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 SNHG28P0DPA3 235 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 WTAPQ15007 396 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 STXBP2Q15833 593 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 TMEM67Q5HYA8 995 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 RETREG2Q8NC44 543 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 PIGSQ96S52 555 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MYL10Q9BUA6 226 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
CKAP2-207ENST00000490903 CERS4Q9HA82 394 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 COL20A1Q9P218 1284 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 MSRAQ9UJ68 235 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 PNMA2Q9UL42 364 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 TAF6LQ9Y6J9 622 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 RAD50Q92878 1312 aa6.29□□□□□ -1.4
CKAP2-207ENST00000490903 UNC80Q8N2C7 3258 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 SP4Q02446 784 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 SART3Q15020 963 aaKnown RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 SLC28A3Q9HAS3 691 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 IL23AQ9NPF7 189 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 NAP1L2Q9ULW6 460 aaPredicted RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 ABCB11O95342 1321 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 ZMYM6O95789 1325 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 NR3C2P08235 984 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 SUPT20HL2P0C7V6 817 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 MYOGP15173 224 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 RXRAP19793 462 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 PURAQ00577 322 aaKnown RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 PSRC1Q6PGN9 363 aaPredicted RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 DHX37Q8IY37 1157 aaKnown RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 DNERQ8NFT8 737 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 NCOA7Q8NI08 942 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 NOC4LQ9BVI4 516 aaKnown RBP6.28□□□□□ -1.4
CKAP2-207ENST00000490903 LRRC2Q9BYS8 371 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 PBX4Q9BYU1 374 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 RTEL1Q9NZ71 1219 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 SLC4A7Q9Y6M7 1214 aa6.28□□□□□ -1.4
CKAP2-207ENST00000490903 WDR19Q8NEZ3 1342 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms