RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 A6NJR5 290 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 RABGGTBP53611 331 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 RAB30Q15771 203 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 ADGRF4Q8IZF3 695 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 ANKS1AQ92625 1134 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 YTHDC1Q96MU7 727 aaKnown RBP19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 MTIF3Q9H2K0 278 aaKnown RBP19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 DIAPH3Q9NSV4 1193 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 MSRAQ9UJ68 235 aa19.46■□□□□ 0.71
SRGAP3-209ENST00000490889 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 MYOGP15173 224 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 IQCA1Q86XH1 822 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 ENAHQ8N8S7 591 aaPredicted RBP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 RGS22Q8NE09 1264 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 PPM1EQ8WY54 764 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 TAAR1Q96RJ0 339 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 ZSCAN10Q96SZ4 725 aaPredicted RBP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 GAS2L1Q99501 681 aaPredicted RBP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 KAT14Q9H8E8 782 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 GPHNQ9NQX3 736 aaPredicted RBP19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 ZSWIM5Q9P217 1185 aa19.45■□□□□ 0.7
SRGAP3-209ENST00000490889 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 TANC1Q9C0D5 1861 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 TRANK1O15050 2925 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 SUPT20HL2P0C7V6 817 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 TTLL4Q14679 1199 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 QRICH1Q2TAL8 776 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 FAM47CQ5HY64 1035 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 CCDC62Q6P9F0 684 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 RPUSD2Q8IZ73 545 aaKnown RBP19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 SYTL5Q8TDW5 730 aaPredicted RBP19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 MPHOSPH6Q99547 160 aaKnown RBP19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 DSCC1Q9BVC3 393 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 SLC4A7Q9Y6M7 1214 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 ABCB11O95342 1321 aa19.44■□□□□ 0.7
SRGAP3-209ENST00000490889 ZBBXA8MT70 800 aa19.43■□□□□ 0.7
SRGAP3-209ENST00000490889 DEFB128Q7Z7B8 93 aa19.43■□□□□ 0.7
SRGAP3-209ENST00000490889 SLC28A3Q9HAS3 691 aa19.43■□□□□ 0.7
SRGAP3-209ENST00000490889 RAD50Q92878 1312 aa19.43■□□□□ 0.7
SRGAP3-209ENST00000490889 NT5C2P49902 561 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 LY6KQ17RY6 165 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 ASPRV1Q53RT3 343 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 BRDTQ58F21 947 aaPredicted RBP19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 CCDC178Q5BJE1 867 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 NFRKBQ6P4R8 1299 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 AFG1LQ8WV93 481 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 JMJD4Q9H9V9 463 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 MYH6P13533 1939 aa19.42■□□□□ 0.7
SRGAP3-209ENST00000490889 KIAA1217Q5T5P2 1943 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 RBAK-RBAKDNI3L0D1 243 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 KPNA6O60684 536 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 ARHGAP1Q07960 439 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 IMMTQ16891 758 aaKnown RBP19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 STAG2Q8N3U4 1231 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 VAT1LQ9HCJ6 419 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 XIRP2A4UGR9 3374 aa19.41■□□□□ 0.7
SRGAP3-209ENST00000490889 B4DLN1 442 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 HIP1O00291 1037 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 OPLAHO14841 1288 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 PFKMP08237 780 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 MMP3P08254 477 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 PARP1P09874 1014 aaKnown RBP19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 IQCF3P0C7M6 154 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 ATP2A2P16615 1042 aaKnown RBP19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 IGFBP4P22692 258 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 MRPL12P52815 198 aaKnown RBP19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 CHMP4BP1P59074 171 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 CCDC85BQ15834 202 aaPredicted RBP19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 TJAP1Q5JTD0 557 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 PPP2R2DQ66LE6 453 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 FBXO11Q86XK2 927 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 NSUN6Q8TEA1 469 aaKnown RBP19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 CTAGE1Q96RT6 745 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 RMDN3Q96TC7 470 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 PCDHA11Q9Y5I1 949 aa19.4■□□□□ 0.7
SRGAP3-209ENST00000490889 TET1Q8NFU7 2136 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 PITPNM1O00562 1244 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 PPP1R11O60927 126 aaPredicted RBP19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 EIF2AK2P19525 551 aaKnown RBP19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 PDE4AP27815 886 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 PTPN11Q06124 597 aaPredicted RBP19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 SEC23AQ15436 765 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 CYB5R4Q7L1T6 521 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 SYMPKQ92797 1274 aaKnown RBP19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 KAT2BQ92831 832 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 KRT23Q9C075 422 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 MAF1Q9H063 256 aa19.39■□□□□ 0.69
SRGAP3-209ENST00000490889 GH1P01241 217 aa19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 STXBP2Q15833 593 aa19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 GDF6Q6KF10 455 aaPredicted RBP19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 CHST3Q7LGC8 479 aa19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 MCF2L2Q86YR7 1114 aa19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 CTNNA3Q9UI47 895 aa19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 MRPL11Q9Y3B7 192 aaKnown RBP19.38■□□□□ 0.69
SRGAP3-209ENST00000490889 PTPRSQ13332 1948 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 ARHGEF15O94989 841 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms