RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 IQUBQ8NA54 791 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 CHURC1Q8WUH1 139 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 P2RX7Q99572 595 aaKnown RBP11.37□□□□□ -0.59
HDAC9-225ENST00000490851 ANO3Q9BYT9 981 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 TRIM5Q9C035 493 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 MAN1B1Q9UKM7 699 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
HDAC9-225ENST00000490851 MYH7BA7E2Y1 1941 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 DICER1Q9UPY3 1922 aaKnown RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 LAD1O00515 517 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 MEIS2O14770 477 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CAVIN2O95810 425 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CFBP00751 764 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CT47A1Q5JQC4 288 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 DCAF15Q66K64 600 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CGNQ9P2M7 1197 aaKnown RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 DDX25Q9UHL0 483 aaKnown RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 POLR2AP24928 1970 aaKnown RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 OPLAHO14841 1288 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 BMP6P22004 513 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
HDAC9-225ENST00000490851 SPP2Q13103 211 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 E2F4Q16254 413 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 TBC1D5Q92609 795 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 CCDC34Q96HJ3 373 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 PICK1Q9NRD5 415 aa11.36□□□□□ -0.59
HDAC9-225ENST00000490851 POTEMA6NI47 508 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 PRPHP41219 470 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 RRAGBQ5VZM2 374 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 CABP7Q86V35 215 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 DISC1Q9NRI5 854 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 ADM5C9JUS6 153 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 UBXN2AP68543 259 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 CUL4BQ13620 913 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 DHX8Q14562 1220 aaKnown RBP11.35□□□□□ -0.59
HDAC9-225ENST00000490851 HSP90AA4PQ58FG1 418 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
HDAC9-225ENST00000490851 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 GLT8D2Q9H1C3 349 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
HDAC9-225ENST00000490851 FLOT1O75955 427 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 SMC2O95347 1197 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 SCYL3Q8IZE3 742 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 AGBL1Q96MI9 1066 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 MTMR9Q96QG7 549 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 MTRQ99707 1265 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 RANBP17Q9H2T7 1088 aaKnown RBP11.34□□□□□ -0.59
HDAC9-225ENST00000490851 LRWD1Q9UFC0 647 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 ZHX2Q9Y6X8 837 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 PLCG1P19174 1290 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 VCAM1P19320 739 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 ARHGAP4P98171 946 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 GPR162Q16538 588 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 PRR16Q569H4 304 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 TRMT44Q8IYL2 757 aaKnown RBP11.34□□□□□ -0.59
HDAC9-225ENST00000490851 LRRC15Q8TF66 581 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 TTC12Q9H892 705 aaPredicted RBP11.34□□□□□ -0.59
HDAC9-225ENST00000490851 ADARB2Q9NS39 739 aaKnown RBP11.34□□□□□ -0.59
HDAC9-225ENST00000490851 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
HDAC9-225ENST00000490851 TULP2O00295 520 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 PTPRAP18433 802 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 SCP2P22307 547 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 ZNF75DP51815 510 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 HMGCS2P54868 508 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 DPYDQ12882 1025 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 AP3B2Q13367 1082 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 PPP4R3AQ6IN85 833 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 KLHL10Q6JEL2 608 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 HOOK2Q96ED9 719 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 CCDC39Q9UFE4 941 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 SSC5DA1L4H1 1573 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 SARSP49591 514 aaKnown RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 MORC3Q14149 939 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 ELOA2Q8IYF1 753 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 HAS1Q92839 578 aa11.33□□□□□ -0.6
HDAC9-225ENST00000490851 DCPSQ96C86 337 aaKnown RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
HDAC9-225ENST00000490851 COBLO75128 1261 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 ALAS1P13196 640 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 ZNF76P36508 570 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms