RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 IL23AQ9NPF7 189 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
DUBR-204ENST00000490441 TNKSO95271 1327 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 ABCB11O95342 1321 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
DUBR-204ENST00000490441 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
DUBR-204ENST00000490441 ACRP10323 421 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 TMEM63BQ5T3F8 832 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
DUBR-204ENST00000490441 RGS22Q8NE09 1264 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 TIFAQ96CG3 184 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 MAF1Q9H063 256 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
DUBR-204ENST00000490441 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
DUBR-204ENST00000490441 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 B4GALT4O60513 344 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 SUPT20HL2P0C7V6 817 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 EDNRBP24530 442 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 PURAQ00577 322 aaKnown RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 TRDNQ13061 729 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
DUBR-204ENST00000490441 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
DUBR-204ENST00000490441 STK25O00506 426 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 KPNA6O60684 536 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 FGBP02675 491 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
DUBR-204ENST00000490441 CCL23P55773 120 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 TTC22Q5TAA0 569 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 FBXO11Q86XK2 927 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
DUBR-204ENST00000490441 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
DUBR-204ENST00000490441 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 HERVK_113Q902F9 699 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
DUBR-204ENST00000490441 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
DUBR-204ENST00000490441 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
DUBR-204ENST00000490441 RAB30Q15771 203 aa13.11□□□□□ -0.31
DUBR-204ENST00000490441 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
DUBR-204ENST00000490441 SYTL5Q8TDW5 730 aaPredicted RBP13.11□□□□□ -0.31
DUBR-204ENST00000490441 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
DUBR-204ENST00000490441 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
DUBR-204ENST00000490441 MYH6P13533 1939 aa13.11□□□□□ -0.31
DUBR-204ENST00000490441 ERICH2A1L162 156 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 CYP2C9P11712 490 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 STXBP2Q15833 593 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 ARHGEF16Q5VV41 709 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 SEPT14Q6ZU15 432 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 COPS5Q92905 334 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 IWS1Q96ST2 819 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
DUBR-204ENST00000490441 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 NOD1Q9Y239 953 aa13.1□□□□□ -0.31
DUBR-204ENST00000490441 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 A6NJR5 290 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 ZBBXA8MT70 800 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 CFBP00751 764 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 GH1P01241 217 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 PFKMP08237 780 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
DUBR-204ENST00000490441 PDE4AP27815 886 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 PBX2P40425 430 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 CHMP4BP1P59074 171 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 NFRKBQ6P4R8 1299 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
DUBR-204ENST00000490441 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 SCLYQ96I15 445 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 IL25Q9H293 177 aa13.09□□□□□ -0.31
DUBR-204ENST00000490441 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
DUBR-204ENST00000490441 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 ARIH2O95376 493 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
DUBR-204ENST00000490441 PTPN11Q06124 597 aaPredicted RBP13.08□□□□□ -0.32
DUBR-204ENST00000490441 TRAF1Q13077 416 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
DUBR-204ENST00000490441 CYB5R4Q7L1T6 521 aa13.08□□□□□ -0.32
DUBR-204ENST00000490441 STAG2Q8N3U4 1231 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms