RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
TM9SF3-206ENST00000490192 ACTL7BQ9Y614 415 aa8.37□□□□□ -1.07
TM9SF3-206ENST00000490192 GAS7O60861 476 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 MT-CO1P00395 513 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 ITIH2P19823 946 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 CCND1P24385 295 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 ETV3P41162 512 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 IARSP41252 1262 aaKnown RBP8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 ARPC5LQ9BPX5 153 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 DSCC1Q9BVC3 393 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 PHF20Q9BVI0 1012 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 VTA1Q9NP79 307 aa8.36□□□□□ -1.07
TM9SF3-206ENST00000490192 FAM95CA0A1B0GW59 222 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 WDR64B1ANS9 1081 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 K7ESF4 209 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 SNUPNO95149 360 aaKnown RBP8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 TIAF1O95411 115 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 TGFB1P01137 390 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 PDE6BP35913 854 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 LSSP48449 732 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 ERVK-21P61565 698 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 PAOXQ6QHF9 649 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 ZC3H7AQ8IWR0 971 aaKnown RBP8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 THG1LQ9NWX6 298 aaKnown RBP8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 PRR13Q9NZ81 148 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 ZKSCAN5Q9Y2L8 839 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 COQ6Q9Y2Z9 468 aa8.35□□□□□ -1.07
TM9SF3-206ENST00000490192 H0Y8X5 98 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 ARVCFO00192 962 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 TRAF5O00463 557 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 LRRN2O75325 713 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 SLITRK5O94991 958 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 GPR85P60893 370 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 DHX8Q14562 1220 aaKnown RBP8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 INAVAQ3KP66 663 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 LONRF3Q496Y0 759 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 HDGFL2Q7Z4V5 671 aaPredicted RBP8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 ZDHHC13Q8IUH4 622 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 C2CD4AQ8NCU7 369 aaPredicted RBP8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 SLC13A1Q9BZW2 595 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 CABP5Q9NP86 173 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 SPTLC3Q9NUV7 552 aa8.34□□□□□ -1.07
TM9SF3-206ENST00000490192 ULK1O75385 1050 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 THBDP07204 575 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 PF4V1P10720 104 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 CD97P48960 835 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 PURAQ00577 322 aaKnown RBP8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 RSPO2Q6UXX9 243 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 TMC3Q7Z5M5 1100 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 C11orf74Q86VG3 221 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 CHTF18Q8WVB6 975 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 TIFAQ96CG3 184 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 AHCYL2Q96HN2 611 aaKnown RBP8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 MFSD14AQ96MC6 490 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 MCMBPQ9BTE3 642 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 TCF7L1Q9HCS4 588 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 GPRC5CQ9NQ84 441 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 MINPP1Q9UNW1 487 aa8.33□□□□□ -1.08
TM9SF3-206ENST00000490192 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 RBAK-RBAKDNI3L0D1 243 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 FZD9O00144 591 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 STXBP3O00186 592 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 IFRD1O00458 451 aaPredicted RBP8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 MEIS1O00470 390 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 CKMP06732 381 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 SRGAP2CP0DJJ0 459 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 PAX3P23760 479 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 FAPQ12884 760 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 PCBP2Q15366 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 MINDY4Q4G0A6 757 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 FBXL6Q8N531 539 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 USP33Q8TEY7 942 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 FRS2Q8WU20 508 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 COPS5Q92905 334 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 B4GALT6Q9UBX8 382 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 ANKRD6Q9Y2G4 727 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 ST14Q9Y5Y6 855 aa8.32□□□□□ -1.08
TM9SF3-206ENST00000490192 MEFVO15553 781 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 TRIM27P14373 513 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 ATP2A2P16615 1042 aaKnown RBP8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 RAB6AP20340 208 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 POU4F1Q01851 419 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 OCRLQ01968 901 aa8.31□□□□□ -1.08
TM9SF3-206ENST00000490192 TMEM177Q53S58 311 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms