RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
UBP1-211ENST00000490112 TTC14Q96N46 770 aa12.58□□□□□ -0.4
UBP1-211ENST00000490112 MAF1Q9H063 256 aa12.58□□□□□ -0.4
UBP1-211ENST00000490112 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
UBP1-211ENST00000490112 RAD50Q92878 1312 aa12.58□□□□□ -0.4
UBP1-211ENST00000490112 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBP1-211ENST00000490112 KPNA6O60684 536 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 FGAP02671 866 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 PFKMP08237 780 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 ACRP10323 421 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 PDE1AP54750 535 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 BAATQ14032 418 aaPredicted RBP12.57□□□□□ -0.4
UBP1-211ENST00000490112 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 EEPD1Q7L9B9 569 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 CHMP4CQ96CF2 233 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 TMEM47Q9BQJ4 181 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 NOC4LQ9BVI4 516 aaKnown RBP12.57□□□□□ -0.4
UBP1-211ENST00000490112 WDR11Q9BZH6 1224 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
UBP1-211ENST00000490112 PDGFCQ9NRA1 345 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 CHD7Q9P2D1 2997 aa12.57□□□□□ -0.4
UBP1-211ENST00000490112 TRANK1O15050 2925 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 RBM47A0AV96 593 aaKnown RBP12.56□□□□□ -0.4
UBP1-211ENST00000490112 PTPDC1A2A3K4 754 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 B4GALT4O60513 344 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 ALDH5A1P51649 535 aaPredicted RBP12.56□□□□□ -0.4
UBP1-211ENST00000490112 SNAP25P60880 206 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 AAMPQ13685 434 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 RRP12Q5JTH9 1297 aaKnown RBP12.56□□□□□ -0.4
UBP1-211ENST00000490112 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 MFSD6Q6ZSS7 791 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
UBP1-211ENST00000490112 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
UBP1-211ENST00000490112 SLC28A3Q9HAS3 691 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 SLC4A7Q9Y6M7 1214 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 LRRC37A2A6NM11 1700 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
UBP1-211ENST00000490112 TTC28Q96AY4 2481 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 HRO43593 1189 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 HSPD1P10809 573 aaKnown RBP12.55□□□□□ -0.4
UBP1-211ENST00000490112 SLC16A2P36021 539 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 PDE4DQ08499 809 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 HDAC1Q13547 482 aaPredicted RBP12.55□□□□□ -0.4
UBP1-211ENST00000490112 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
UBP1-211ENST00000490112 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 SCFD2Q8WU76 684 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 ATXN2LQ8WWM7 1075 aaKnown RBP12.55□□□□□ -0.4
UBP1-211ENST00000490112 MTG1Q9BT17 334 aaPredicted RBP12.55□□□□□ -0.4
UBP1-211ENST00000490112 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
UBP1-211ENST00000490112 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 NFIBO00712 420 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 PDHBP11177 359 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 ACTN1P12814 892 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 RFC2P35250 354 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 CCL23P55773 120 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 RRP1P56182 461 aaKnown RBP12.54□□□□□ -0.4
UBP1-211ENST00000490112 PURAQ00577 322 aaKnown RBP12.54□□□□□ -0.4
UBP1-211ENST00000490112 PTPN11Q06124 597 aaPredicted RBP12.54□□□□□ -0.4
UBP1-211ENST00000490112 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 TTBK2Q6IQ55 1244 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 OR6J1Q8NGC5 347 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
UBP1-211ENST00000490112 ESR2Q92731 530 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 PRDM6Q9NQX0 595 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
UBP1-211ENST00000490112 PCDHA11Q9Y5I1 949 aa12.54□□□□□ -0.4
UBP1-211ENST00000490112 A0A0D9SFI3 127 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 A6NJR5 290 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 CALML3P27482 149 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 PSMC6P62333 389 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
UBP1-211ENST00000490112 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 RASGRP2Q7LDG7 609 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 FAM227BQ96M60 508 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 TNKSO95271 1327 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
UBP1-211ENST00000490112 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
UBP1-211ENST00000490112 LCTP09848 1927 aa12.52□□□□□ -0.4
UBP1-211ENST00000490112 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 ZNF213O14771 459 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 MYL3P08590 195 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 EDNRBP24530 442 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 TTLL4Q14679 1199 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms