RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 RASGRP4Q8TDF6 673 aa19.2■□□□□ 0.66
SFXN5-220ENST00000490056 PGBD1Q96JS3 809 aa19.2■□□□□ 0.66
SFXN5-220ENST00000490056 PHF20Q9BVI0 1012 aa19.2■□□□□ 0.66
SFXN5-220ENST00000490056 PXMP2Q9NR77 195 aa19.2■□□□□ 0.66
SFXN5-220ENST00000490056 ADD3Q9UEY8 706 aaKnown RBP19.2■□□□□ 0.66
SFXN5-220ENST00000490056 SMC3Q9UQE7 1217 aa19.2■□□□□ 0.66
SFXN5-220ENST00000490056 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.2■□□□□ 0.66
SFXN5-220ENST00000490056 MYCP01106 439 aaPredicted RBP19.19■□□□□ 0.66
SFXN5-220ENST00000490056 INHAP05111 366 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 XBP1P17861 261 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 GNA11P29992 359 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 CLK2P49760 499 aaKnown RBP19.19■□□□□ 0.66
SFXN5-220ENST00000490056 GUCY1B3Q02153 619 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 CACNB2Q08289 660 aaPredicted RBP19.19■□□□□ 0.66
SFXN5-220ENST00000490056 KRT40Q6A162 431 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 MAMDC4Q6UXC1 1216 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 IL31RAQ8NI17 732 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
SFXN5-220ENST00000490056 GLT8D2Q9H1C3 349 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
SFXN5-220ENST00000490056 PCDHA6Q9UN73 950 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 PCDHA8Q9Y5H6 950 aa19.19■□□□□ 0.66
SFXN5-220ENST00000490056 ASB14A6NK59 587 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 EEPD1Q7L9B9 569 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 BLIDQ8IZY5 108 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 TRPV1Q8NER1 839 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 ZFP91Q96JP5 570 aaPredicted RBP19.18■□□□□ 0.66
SFXN5-220ENST00000490056 C8orf76Q96K31 380 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 PDCD2LQ9BRP1 358 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 PCDHA4Q9UN74 947 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
SFXN5-220ENST00000490056 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 NR3C2P08235 984 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
SFXN5-220ENST00000490056 PRKAR2AP13861 404 aaKnown RBP19.17■□□□□ 0.66
SFXN5-220ENST00000490056 EDNRBP24530 442 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 PDE4DQ08499 809 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 TRIM29Q14134 588 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 PGM5Q15124 567 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 REXO1Q8N1G1 1221 aaKnown RBP19.17■□□□□ 0.66
SFXN5-220ENST00000490056 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
SFXN5-220ENST00000490056 DAGLBQ8NCG7 672 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 SPRYD3Q8NCJ5 442 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 BICD2Q8TD16 824 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 OXER1Q8TDS5 423 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 ANO3Q9BYT9 981 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
SFXN5-220ENST00000490056 MTFR1Q15390 333 aa19.16■□□□□ 0.66
SFXN5-220ENST00000490056 MAP3K21Q5TCX8 1036 aa19.16■□□□□ 0.66
SFXN5-220ENST00000490056 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
SFXN5-220ENST00000490056 INTS4Q96HW7 963 aaKnown RBP19.16■□□□□ 0.66
SFXN5-220ENST00000490056 LOC102724159A0A0B4J2E5 919 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 M0R2N6 131 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 FOSP01100 380 aaPredicted RBP19.15■□□□□ 0.66
SFXN5-220ENST00000490056 MMP1P03956 469 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 CYBAP13498 195 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 CCND3P30281 292 aaPredicted RBP19.15■□□□□ 0.66
SFXN5-220ENST00000490056 AP3B2Q13367 1082 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 PWP2Q15269 919 aaKnown RBP19.15■□□□□ 0.66
SFXN5-220ENST00000490056 GALNT17Q6IS24 598 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 TEX2Q8IWB9 1127 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 FBXO16Q8IX29 292 aaPredicted RBP19.15■□□□□ 0.66
SFXN5-220ENST00000490056 ARMC5Q96C12 935 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 ZNF333Q96JL9 665 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 IWS1Q96ST2 819 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 KATNBL1Q9H079 304 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 UNC93B1Q9H1C4 597 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
SFXN5-220ENST00000490056 CNPY2Q9Y2B0 182 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 FRMPD4Q14CM0 1322 aa19.15■□□□□ 0.66
SFXN5-220ENST00000490056 B4DLN1 442 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 ZNF865P0CJ78 1059 aaPredicted RBP19.14■□□□□ 0.65
SFXN5-220ENST00000490056 CCND2P30279 289 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 NR5A1Q13285 461 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 ACVR2BQ13705 512 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 FBXO18Q8NFZ0 1043 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 MPHOSPH6Q99547 160 aaKnown RBP19.14■□□□□ 0.65
SFXN5-220ENST00000490056 PDGFCQ9NRA1 345 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 KIF3AQ9Y496 699 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 HTTP42858 3142 aa19.14■□□□□ 0.65
SFXN5-220ENST00000490056 BTBD18B2RXH4 712 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
SFXN5-220ENST00000490056 CCL5P13501 91 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 CNGA1P29973 690 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 KRT2P35908 639 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 MRPS9P82933 396 aaKnown RBP19.13■□□□□ 0.65
SFXN5-220ENST00000490056 STXBP2Q15833 593 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 DIS3L2Q8IYB7 885 aaKnown RBP19.13■□□□□ 0.65
SFXN5-220ENST00000490056 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 RTEL1Q9NZ71 1219 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
SFXN5-220ENST00000490056 SREBF1P36956 1147 aa19.12■□□□□ 0.65
SFXN5-220ENST00000490056 PCNX4Q63HM2 1172 aa19.12■□□□□ 0.65
SFXN5-220ENST00000490056 LARP1BQ659C4 914 aaKnown RBP19.12■□□□□ 0.65
SFXN5-220ENST00000490056 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
SFXN5-220ENST00000490056 TAPT1Q6NXT6 567 aa19.12■□□□□ 0.65
SFXN5-220ENST00000490056 BRMS1Q9HCU9 246 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms