RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 FPR2P25090 351 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 BCL6P41182 706 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 IFRD2Q12894 506 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-206ENST00000489868 KCNAB2Q13303 367 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 CCDC144BQ3MJ40 725 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 IQCEQ6IPM2 695 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 USP53Q70EK8 1073 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 LILRB2Q8N423 598 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 KRTAP4-12Q9BQ66 201 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 PIF1Q9H611 641 aa8.02□□□□□ -1.13
CCDC39-206ENST00000489868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC39-206ENST00000489868 MBD1Q9UIS9 605 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-206ENST00000489868 ZC3H12DA2A288 527 aaKnown RBP8.01□□□□□ -1.13
CCDC39-206ENST00000489868 HRKO00198 91 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 ETV2O00321 342 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-206ENST00000489868 CYBBP04839 570 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 SRSF3P84103 164 aaKnown RBP8.01□□□□□ -1.13
CCDC39-206ENST00000489868 PAQR3Q6TCH7 311 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 KCNT2Q6UVM3 1135 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 Q8N1Y9 231 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 CNTD2Q9H8S5 307 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 SIT1Q9Y3P8 196 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 PCDHA2Q9Y5H9 948 aa8.01□□□□□ -1.13
CCDC39-206ENST00000489868 TIMM13Q9Y5L4 95 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-206ENST00000489868 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 A0A1W2PQJ5 194 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 NTRK1P04629 796 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 TMC6Q7Z403 805 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 JMYQ8N9B5 988 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 SLC26A8Q96RN1 970 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 PHF20Q9BVI0 1012 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 ZSWIM4Q9H7M6 989 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 ASXL2Q76L83 1435 aa8□□□□□ -1.13
CCDC39-206ENST00000489868 TEX51A0A1B0GUA7 166 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 C22orf46C9J442 243 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 F8W031 263 aaPredicted RBP7.99□□□□□ -1.13
CCDC39-206ENST00000489868 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
CCDC39-206ENST00000489868 C1QTNF9P0C862 333 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 MAPKAPK2P49137 400 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 EPHB3P54753 998 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 RPL11P62913 178 aaKnown RBP7.99□□□□□ -1.13
CCDC39-206ENST00000489868 WWC2Q6AWC2 1192 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 DPH6Q7L8W6 267 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 BCAS3Q9H6U6 928 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 KANSL2Q9H9L4 492 aa7.99□□□□□ -1.13
CCDC39-206ENST00000489868 PPARGC1AQ9UBK2 798 aaKnown RBP7.99□□□□□ -1.13
CCDC39-206ENST00000489868 TRBV23-1A0A0A0MS06 115 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 CDR1P51861 262 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 DLG4P78352 724 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 PRR5P85299 388 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 NR1I3Q14994 352 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 CEP68Q76N32 757 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 USP33Q8TEY7 942 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 KCNN1Q92952 543 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 KISS1RQ969F8 398 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-206ENST00000489868 GPR27Q9NS67 375 aa7.98□□□□□ -1.13
CCDC39-206ENST00000489868 ABLIM1O14639 778 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 SEMA7AO75326 666 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 TSPAN15O95858 294 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 MED14OSP0DP75 135 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 FBLN1P23142 703 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 GLDCP23378 1020 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 ZNF200P98182 395 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-206ENST00000489868 STYK1Q6J9G0 422 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 ZC3H14Q6PJT7 736 aaKnown RBP7.97□□□□□ -1.13
CCDC39-206ENST00000489868 SCUBE1Q8IWY4 988 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 NETO2Q8NC67 525 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 DCAF4Q8WV16 495 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 TRAF6Q9Y4K3 522 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 X6R8D5 127 aa7.97□□□□□ -1.13
CCDC39-206ENST00000489868 NCKAP1LP55160 1127 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 LSAMPQ13449 338 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 NFE2L2Q16236 605 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 ATG14Q6ZNE5 492 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 SLC38A3Q99624 504 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 CDC6Q99741 560 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 MRPS23Q9Y3D9 190 aaKnown RBP7.96□□□□□ -1.14
CCDC39-206ENST00000489868 PCDHA5Q9Y5H7 936 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 PTCH2Q9Y6C5 1203 aa7.96□□□□□ -1.14
CCDC39-206ENST00000489868 MYO1BO43795 1136 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 C2orf27AQ580R0 203 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 TMEM132EQ6IEE7 984 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 RSPO2Q6UXX9 243 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-206ENST00000489868 CABP7Q86V35 215 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 LDHDQ86WU2 507 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 IGDCC3Q8IVU1 814 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 BHLHE22Q8NFJ8 381 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-206ENST00000489868 THAP3Q8WTV1 239 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-206ENST00000489868 TRMT2BQ96GJ1 504 aaKnown RBP7.95□□□□□ -1.14
CCDC39-206ENST00000489868 TMEM169Q96HH4 297 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 DHRS4Q9BTZ2 278 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 GOLGA2P5Q9HBQ8 144 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 SIRT5Q9NXA8 310 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 CLDND1Q9NY35 253 aa7.95□□□□□ -1.14
CCDC39-206ENST00000489868 IRS2Q9Y4H2 1338 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms