RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CYP2B6P20813 491 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 PDCP20941 246 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 PRMT2P55345 433 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 NR5A1Q13285 461 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 AP3B2Q13367 1082 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 PGBD1Q96JS3 809 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 RMDN3Q96TC7 470 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 PXMP2Q9NR77 195 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 FLRT1Q9NZU1 646 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 ADD3Q9UEY8 706 aaKnown RBP18.43■□□□□ 0.54
CLIC4-203ENST00000489758 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
CLIC4-203ENST00000489758 PLXNB2O15031 1838 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 SMCHD1A6NHR9 2005 aa18.43■□□□□ 0.54
CLIC4-203ENST00000489758 SPDYE3A6NKU9 549 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
CLIC4-203ENST00000489758 EDNRBP24530 442 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 ALDH5A1P51649 535 aaPredicted RBP18.42■□□□□ 0.54
CLIC4-203ENST00000489758 CCL14Q16627 93 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
CLIC4-203ENST00000489758 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 MAMDC4Q6UXC1 1216 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 MORC4Q8TE76 937 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 NSUN6Q8TEA1 469 aaKnown RBP18.42■□□□□ 0.54
CLIC4-203ENST00000489758 CRYGNQ8WXF5 182 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 SLC5A4Q9NY91 659 aa18.42■□□□□ 0.54
CLIC4-203ENST00000489758 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
CLIC4-203ENST00000489758 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 EIF2AK2P19525 551 aaKnown RBP18.41■□□□□ 0.54
CLIC4-203ENST00000489758 DDIT3P35638 169 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLIC4-203ENST00000489758 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 OLFML2BQ68BL8 750 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 IL31RAQ8NI17 732 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 PDCD2LQ9BRP1 358 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 ANO3Q9BYT9 981 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 BRMS1Q9HCU9 246 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 MTMR6Q9Y217 621 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 CASP8AP2Q9UKL3 1982 aa18.41■□□□□ 0.54
CLIC4-203ENST00000489758 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 FAM205CA6NFA0 338 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 H3BQV1 296 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 EDIL3O43854 480 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
CLIC4-203ENST00000489758 SREBF1P36956 1147 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 PGM5Q15124 567 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
CLIC4-203ENST00000489758 KRT25Q7Z3Z0 450 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 CTU1Q7Z7A3 348 aaKnown RBP18.4■□□□□ 0.54
CLIC4-203ENST00000489758 MSL3Q8N5Y2 521 aaKnown RBP18.4■□□□□ 0.54
CLIC4-203ENST00000489758 TRIB2Q92519 343 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 IWS1Q96ST2 819 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 FOXP1Q9H334 677 aaPredicted RBP18.4■□□□□ 0.54
CLIC4-203ENST00000489758 PTPN22Q9Y2R2 807 aa18.4■□□□□ 0.54
CLIC4-203ENST00000489758 MGAMO43451 1857 aa18.39■□□□□ 0.54
CLIC4-203ENST00000489758 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
CLIC4-203ENST00000489758 STX6O43752 255 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 UBXN2AP68543 259 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 PKP1Q13835 747 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 TINF2Q9BSI4 451 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 PTCH2Q9Y6C5 1203 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 LCTP09848 1927 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 MYH6P13533 1939 aa18.39■□□□□ 0.53
CLIC4-203ENST00000489758 ASB14A6NK59 587 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 ADCY3O60266 1144 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 NR3C2P08235 984 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 ELNP15502 786 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
CLIC4-203ENST00000489758 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 PIK3AP1Q6ZUJ8 805 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 ARMCX2Q7L311 632 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 NOSTRINQ8IVI9 506 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 RAET1EQ8TD07 263 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 PXYLP1Q8TE99 480 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 SYNGAP1Q96PV0 1343 aa18.38■□□□□ 0.53
CLIC4-203ENST00000489758 CCDC194A0A1B0GVG4 234 aa18.37■□□□□ 0.53
CLIC4-203ENST00000489758 SNAI1O95863 264 aaPredicted RBP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 CYP2C19P33261 490 aa18.37■□□□□ 0.53
CLIC4-203ENST00000489758 ARHGAP4P98171 946 aa18.37■□□□□ 0.53
CLIC4-203ENST00000489758 MLLT1Q03111 559 aaPredicted RBP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 NONOQ15233 471 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 XRRA1Q6P2D8 792 aa18.37■□□□□ 0.53
CLIC4-203ENST00000489758 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
CLIC4-203ENST00000489758 IPO9Q96P70 1041 aaKnown RBP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
CLIC4-203ENST00000489758 CYP3A4P08684 503 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
CLIC4-203ENST00000489758 CCND2P30279 289 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 PDE4DQ08499 809 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 TRIM32Q13049 653 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 RESTQ13127 1097 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 INF2Q27J81 1249 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 MCTP1Q6DN14 999 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 SLAIN1Q8ND83 568 aa18.36■□□□□ 0.53
CLIC4-203ENST00000489758 DAXXQ9UER7 740 aaPredicted RBP18.36■□□□□ 0.53
CLIC4-203ENST00000489758 B4DLN1 442 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms