RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 TRIM43BA6NCK2 446 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 ARVCFO00192 962 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 TXNP10599 105 aaKnown RBP20.66■□□□□ 0.9
ABCF3-217ENST00000489719 SMARCA1P28370 1054 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 CDK7P50613 346 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 KRT32Q14532 448 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 TTLL4Q14679 1199 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 PPP2R5BQ15173 497 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 SLC35G1Q2M3R5 365 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 TSGA10IPQ3SY00 556 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 CXCL17Q6UXB2 119 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 OR6J1Q8NGC5 347 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 BADQ92934 168 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 TRIM43Q96BQ3 446 aaPredicted RBP20.66■□□□□ 0.9
ABCF3-217ENST00000489719 RRP36Q96EU6 259 aaKnown RBP20.66■□□□□ 0.9
ABCF3-217ENST00000489719 LRRC2Q9BYS8 371 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 COL20A1Q9P218 1284 aa20.66■□□□□ 0.9
ABCF3-217ENST00000489719 FRMPD3Q5JV73 1810 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 GCOM1H8Y6P7 765 aaPredicted RBP20.65■□□□□ 0.9
ABCF3-217ENST00000489719 POLR2MP0CAP2 368 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 RAG1P15918 1043 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 PTGS1P23219 599 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 CPT1AP50416 773 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 HSD17B4P51659 736 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 SEPT14Q6ZU15 432 aa20.65■□□□□ 0.9
ABCF3-217ENST00000489719 DHX32Q7L7V1 743 aaKnown RBP20.65■□□□□ 0.9
ABCF3-217ENST00000489719 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 TLR3O15455 904 aaKnown RBP20.64■□□□□ 0.89
ABCF3-217ENST00000489719 EIF3JO75822 258 aaKnown RBP20.64■□□□□ 0.89
ABCF3-217ENST00000489719 NR3C2P08235 984 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 EIF2AK2P19525 551 aaKnown RBP20.64■□□□□ 0.89
ABCF3-217ENST00000489719 FAAP100Q0VG06 881 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 SPZ1Q9BXG8 430 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 SEZ6LQ9BYH1 1024 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 PXMP2Q9NR77 195 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 POLR3EQ9NVU0 708 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 PPP4R2Q9NY27 417 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 SEC63Q9UGP8 760 aaKnown RBP20.64■□□□□ 0.89
ABCF3-217ENST00000489719 ALPK3Q96L96 1907 aa20.64■□□□□ 0.89
ABCF3-217ENST00000489719 OPLAHO14841 1288 aa20.63■□□□□ 0.89
ABCF3-217ENST00000489719 HMGB1P09429 215 aaKnown RBP20.63■□□□□ 0.89
ABCF3-217ENST00000489719 HOXA13P31271 388 aaPredicted RBP20.63■□□□□ 0.89
ABCF3-217ENST00000489719 ITGA7Q13683 1181 aa20.63■□□□□ 0.89
ABCF3-217ENST00000489719 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
ABCF3-217ENST00000489719 RASEFQ8IZ41 740 aa20.63■□□□□ 0.89
ABCF3-217ENST00000489719 FANCBQ8NB91 859 aa20.63■□□□□ 0.89
ABCF3-217ENST00000489719 KPNA6O60684 536 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-217ENST00000489719 MYL3P08590 195 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 MYCLP12524 364 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-217ENST00000489719 RXRAP19793 462 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 EXOSC10Q01780 885 aaKnown RBP20.62■□□□□ 0.89
ABCF3-217ENST00000489719 GHRHRQ02643 423 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 COL9A3Q14050 684 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-217ENST00000489719 SGMS1Q86VZ5 419 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 FCHSD1Q86WN1 690 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 SRBD1Q8N5C6 995 aaKnown RBP20.62■□□□□ 0.89
ABCF3-217ENST00000489719 DNAH12Q6ZR08 3092 aa20.62■□□□□ 0.89
ABCF3-217ENST00000489719 REC8O95072 547 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 FGD1P98174 961 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 LRIT3Q3SXY7 679 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 RAB11FIP4Q86YS3 637 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 CCDC82Q8N4S0 544 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 COPS5Q92905 334 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 TRIOBPQ9H2D6 2365 aa20.61■□□□□ 0.89
ABCF3-217ENST00000489719 PLEKHA8P1O95397 391 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 TIMP1P01033 207 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 LY6KQ17RY6 165 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 CCDC62Q6P9F0 684 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 CMTR1Q8N1G2 835 aaKnown RBP20.6■□□□□ 0.89
ABCF3-217ENST00000489719 SLC43A3Q8NBI5 491 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 CUL5Q93034 780 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 PDCD2LQ9BRP1 358 aa20.6■□□□□ 0.89
ABCF3-217ENST00000489719 MTG1Q9BT17 334 aaPredicted RBP20.6■□□□□ 0.89
ABCF3-217ENST00000489719 MCM3APO60318 1980 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 A6NJR5 290 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 ARIH2O95376 493 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 GH1P01241 217 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 ITGB8P26012 769 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 PSMC6P62333 389 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 VSIG10LQ86VR7 867 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 FAM126BQ8IXS8 530 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 TCEANC2Q96MN5 208 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 MRVI1Q9Y6F6 885 aa20.59■□□□□ 0.89
ABCF3-217ENST00000489719 SOX1O00570 391 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-217ENST00000489719 ZBTB43O43298 467 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 CCND2P30279 289 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 HSPA4P34932 840 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 PURAQ00577 322 aaKnown RBP20.58■□□□□ 0.89
ABCF3-217ENST00000489719 PGM5Q15124 567 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 KCNV1Q6PIU1 500 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 SMARCC2Q8TAQ2 1214 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 KCNB2Q92953 911 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 LRCH3Q96II8 777 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
ABCF3-217ENST00000489719 DDX41Q9UJV9 622 aaKnown RBP20.58■□□□□ 0.89
ABCF3-217ENST00000489719 TBX21Q9UL17 535 aa20.58■□□□□ 0.89
ABCF3-217ENST00000489719 GRIN2DO15399 1336 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms