RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 NDUFA8P51970 172 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 NLRP12P59046 1061 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ICA1Q05084 483 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF543Q08ER8 600 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 AP3B2Q13367 1082 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 GRIK5Q16478 980 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 TMEM266Q2M3C6 531 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CTC1Q2NKJ3 1217 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ANO6Q4KMQ2 910 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 DTHD1Q6ZMT9 781 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 HEATR3Q7Z4Q2 680 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 NEK8Q86SG6 692 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CKAP2LQ8IYA6 745 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 GPC2Q8N158 579 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 REXO1Q8N1G1 1221 aaKnown RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CHURC1Q8WUH1 139 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 DPF2Q92785 391 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CUL5Q93034 780 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 MRFAP1L1Q96HT8 127 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 AIFM3Q96NN9 605 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 MAF1Q9H063 256 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 EHMT1Q9H9B1 1298 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 GOPCQ9HD26 462 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 TOR4AQ9NXH8 423 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 CLIP2Q9UDT6 1046 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 HACL1Q9UJ83 578 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 TUBE1Q9UJT0 475 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 FBXO2Q9UK22 296 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 KCNJ14Q9UNX9 436 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 RABGAP1Q9Y3P9 1069 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
SF3A3-208ENST00000489537 ASTN2O75129 1339 aaPredicted RBP7.21□□□□□ -1.26
SF3A3-208ENST00000489537 SMCO2A6NFE2 343 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 STXBP3O00186 592 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 WNT7AO00755 349 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 NMT2O60551 498 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 ASNSP08243 561 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 ERCC5P28715 1186 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-208ENST00000489537 GSDMDP57764 484 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 NR5A1Q13285 461 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 TTLL12Q14166 644 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-208ENST00000489537 NT5DC1Q5TFE4 455 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 MOXD1Q6UVY6 613 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 PIK3AP1Q6ZUJ8 805 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 FAM160B2Q86V87 743 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 ANKRD20A12PQ8NF67 263 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 SMARCE1Q969G3 411 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 CHAMP1Q96JM3 812 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 CSRNP1Q96S65 589 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 GMLQ99445 158 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
SF3A3-208ENST00000489537 BAZ2AQ9UIF9 1905 aaKnown RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 DDX60LQ5H9U9 1706 aaKnown RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 AXIN1O15169 862 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 ADCY5O95622 1261 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 AKR1B1P15121 316 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 UBA7P41226 1012 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 USP11P51784 963 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 STIM1Q13586 685 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 PDIA5Q14554 519 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 POSTNQ15063 836 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 DCAF15Q66K64 600 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 SLFN13Q68D06 897 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 PPP4R3AQ6IN85 833 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 SHC4Q6S5L8 630 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 BTNL9Q6UXG8 535 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 SLC44A5Q8NCS7 719 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 SNIP1Q8TAD8 396 aaKnown RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 MTMR8Q96EF0 704 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CALML4Q96GE6 196 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CTAGE1Q96RT6 745 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 ZIC5Q96T25 663 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 AMNQ9BXJ7 453 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 PANK2Q9BZ23 570 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 GLIS2Q9BZE0 524 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 TRIM5Q9C035 493 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CCSER1Q9C0I3 900 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 GOLPH3LQ9H4A5 285 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 CBX8Q9HC52 389 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 RIC8AQ9NPQ8 531 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 DDX4Q9NQI0 724 aaKnown RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 AAASQ9NRG9 546 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 MAP3K20Q9NYL2 800 aaKnown RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 GPRC5DQ9NZD1 345 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF70Q9UC06 446 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-208ENST00000489537 PCDHB6Q9Y5E3 794 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 PPP2R3BQ9Y5P8 575 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 TCHHQ07283 1943 aa7.19□□□□□ -1.26
SF3A3-208ENST00000489537 MYH15Q9Y2K3 1946 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms