RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 FGD4Q96M96 766 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 C6orf50Q9HD87 102 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 HMX1Q9NP08 348 aaPredicted RBP17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 KIAA1217Q5T5P2 1943 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 HTTP42858 3142 aa17.8■□□□□ 0.44
SMIM11A-206ENST00000489469 RPTORQ8N122 1335 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 LRRC37A2A6NM11 1700 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 SMCO2A6NFE2 343 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 CYP2C19P33261 490 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 HMGN5P82970 282 aaKnown RBP17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 TYW1BQ6NUM6 668 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 MORC4Q8TE76 937 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 ABHD8Q96I13 439 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 IWS1Q96ST2 819 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
SMIM11A-206ENST00000489469 SPDYE3A6NKU9 549 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 MEIS2O14770 477 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 PPFIA3O75145 1194 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 CD2BP2O95400 341 aaKnown RBP17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 FOSP01100 380 aaPredicted RBP17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 CAPN2P17655 700 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 ST3GAL1Q11201 340 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 ARHGEF16Q5VV41 709 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 GALNT17Q6IS24 598 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 EHMT1Q9H9B1 1298 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 COL20A1Q9P218 1284 aa17.78■□□□□ 0.44
SMIM11A-206ENST00000489469 ASTN1O14525 1302 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 MSCO60682 206 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 CYBAP13498 195 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 EDNRBP24530 442 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 PDE4DQ08499 809 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 FCHSD1Q86WN1 690 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 SNX21Q969T3 373 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 VPS54Q9P1Q0 977 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 KIF3AQ9Y496 699 aa17.77■□□□□ 0.44
SMIM11A-206ENST00000489469 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.43
SMIM11A-206ENST00000489469 FRMPD4Q14CM0 1322 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 CCL5P13501 91 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 NLRP5P59047 1200 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 TRIM32Q13049 653 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 ALG1Q9BT22 464 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 TMEM106CQ9BVX2 250 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
SMIM11A-206ENST00000489469 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 JAK2O60674 1132 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 ACVR2BQ13705 512 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 STXBP2Q15833 593 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 XRRA1Q6P2D8 792 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 REXO1Q8N1G1 1221 aaKnown RBP17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 PAK6Q9NQU5 681 aaPredicted RBP17.75■□□□□ 0.43
SMIM11A-206ENST00000489469 K7ELQ4 463 aaPredicted RBP17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 SEPT4O43236 478 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 STAM2O75886 525 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 NR3C2P08235 984 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 AKR1A1P14550 325 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 TRIM29Q14134 588 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 PGM5Q15124 567 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 MTFR1Q15390 333 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 UBE2SQ16763 222 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 UNC93B1Q9H1C4 597 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 ZHX1Q9UKY1 873 aaPredicted RBP17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 PCDHA4Q9UN74 947 aa17.74■□□□□ 0.43
SMIM11A-206ENST00000489469 EIF3JO75822 258 aaKnown RBP17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 GJB1P08034 283 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 ZNF865P0CJ78 1059 aaPredicted RBP17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 CNGA1P29973 690 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 CCND2P30279 289 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 CCND3P30281 292 aaPredicted RBP17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 VASPP50552 380 aaPredicted RBP17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 VSIG10LQ86VR7 867 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 HSCBQ8IWL3 235 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 AIFM3Q96NN9 605 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 PHF20Q9BVI0 1012 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 KATNBL1Q9H079 304 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
SMIM11A-206ENST00000489469 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms