RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
SSBP1-212ENST00000489378 SEPT9Q9UHD8 586 aaPredicted RBP11.06□□□□□ -0.64
SSBP1-212ENST00000489378 E9PSI1 815 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 PRKAB2O43741 272 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 ZBED4O75132 1171 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 GNAI2P04899 355 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 PDE6AP16499 860 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 OS9Q13438 667 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 TAPT1Q6NXT6 567 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 ADHFE1Q8IWW8 467 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 CHST13Q8NET6 341 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 EAF2Q96CJ1 260 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP1-212ENST00000489378 FAM86C1Q9NVL1 165 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 FBXO40Q9UH90 709 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 MUTYHQ9UIF7 546 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
SSBP1-212ENST00000489378 SCN10AQ9Y5Y9 1956 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 NDUFB10O96000 172 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 PURAQ00577 322 aaKnown RBP11.04□□□□□ -0.64
SSBP1-212ENST00000489378 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 GPNMBQ14956 572 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 TMED8Q6PL24 325 aaPredicted RBP11.04□□□□□ -0.64
SSBP1-212ENST00000489378 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 SLC38A10Q9HBR0 1119 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 PRKAG3Q9UGI9 489 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 Q9Y3F1 56 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 DCHS1Q96JQ0 3298 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
SSBP1-212ENST00000489378 ASB14A6NK59 587 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 F5H6K3 240 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 GJB5O95377 273 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 MYL3P08590 195 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 KLRC3Q07444 240 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 HERC4Q5GLZ8 1057 aaPredicted RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 SLC9C2Q5TAH2 1124 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 C12orf60Q5U649 245 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 EP400NLQ6ZTU2 488 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 RAD9AQ99638 391 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 C17orf80Q9BSJ5 609 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 ALG13Q9NP73 1137 aaKnown RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 MYO15AQ9UKN7 3530 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
SSBP1-212ENST00000489378 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
SSBP1-212ENST00000489378 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.64
SSBP1-212ENST00000489378 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.64
SSBP1-212ENST00000489378 NBR1Q14596 966 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 SLFNL1Q499Z3 407 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 RNF135Q8IUD6 432 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 MRPL38Q96DV4 380 aaKnown RBP11.02□□□□□ -0.64
SSBP1-212ENST00000489378 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.64
SSBP1-212ENST00000489378 POLR3EQ9NVU0 708 aa11.02□□□□□ -0.64
SSBP1-212ENST00000489378 KMT2EQ8IZD2 1858 aa11.02□□□□□ -0.65
SSBP1-212ENST00000489378 USP17L12C9JPN9 530 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 USP17L21D6R901 530 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 BCAR3O75815 825 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 BFSP2Q13515 415 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 COL19A1Q14993 1142 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 TCEAL5Q5H9L2 206 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 KIAA1211Q6ZU35 1233 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 BMP8AQ7Z5Y6 402 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 EDAQ92838 391 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 PABPC5Q96DU9 382 aaKnown RBP11.01□□□□□ -0.65
SSBP1-212ENST00000489378 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
SSBP1-212ENST00000489378 ACAD9Q9H845 621 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 FAM50BQ9Y247 325 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 COG6Q9Y2V7 657 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 LCTP09848 1927 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 PLXNA3P51805 1871 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 TMEM221A6NGB7 291 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 M0R296 226 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 OAZ1P54368 228 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 DUSP28Q4G0W2 176 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 NFRKBQ6P4R8 1299 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 CTAGE1Q96RT6 745 aa11.01□□□□□ -0.65
SSBP1-212ENST00000489378 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms