RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 LPXNO60711 386 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 ARIH2O95376 493 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 ICAM1P05362 532 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 NOVP48745 357 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 FAM47CQ5HY64 1035 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 TMEM67Q5HYA8 995 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 ARNTL2Q8WYA1 636 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
USP11-210ENST00000489030 TLL1O43897 1013 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 CDC45O75419 566 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
USP11-210ENST00000489030 CALML3P27482 149 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 GRB10Q13322 594 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 OR6J1Q8NGC5 347 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 RUFY2Q8WXA3 655 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 CD320Q9NPF0 282 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 TRANK1O15050 2925 aa13.48□□□□□ -0.25
USP11-210ENST00000489030 PTPDC1A2A3K4 754 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 RANBP6O60518 1105 aaKnown RBP13.47□□□□□ -0.25
USP11-210ENST00000489030 CHMLP26374 656 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 DHX38Q92620 1227 aaKnown RBP13.47□□□□□ -0.25
USP11-210ENST00000489030 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 MTG1Q9BT17 334 aaPredicted RBP13.47□□□□□ -0.25
USP11-210ENST00000489030 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 CPVLQ9H3G5 476 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
USP11-210ENST00000489030 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
USP11-210ENST00000489030 EDNRBP24530 442 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 CHMP4BP1P59074 171 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 GDPD5Q8WTR4 605 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 DCAF4Q8WV16 495 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 SEZ6LQ9BYH1 1024 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
USP11-210ENST00000489030 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 PTPRSQ13332 1948 aa13.46□□□□□ -0.25
USP11-210ENST00000489030 SLC3A2P08195 630 aaKnown RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 PFKMP08237 780 aa13.45□□□□□ -0.26
USP11-210ENST00000489030 SUPT20HL2P0C7V6 817 aa13.45□□□□□ -0.26
USP11-210ENST00000489030 MFAP1P55081 439 aaKnown RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 RPS6P62753 249 aaKnown RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 DEFB103AP81534 67 aa13.45□□□□□ -0.26
USP11-210ENST00000489030 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 MCMDC2Q4G0Z9 681 aa13.45□□□□□ -0.26
USP11-210ENST00000489030 CWC27Q6UX04 472 aaKnown RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 TBC1D5Q92609 795 aa13.45□□□□□ -0.26
USP11-210ENST00000489030 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
USP11-210ENST00000489030 TRIP12Q14669 1992 aaPredicted RBP13.44□□□□□ -0.26
USP11-210ENST00000489030 A6NJR5 290 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 ORC4O43929 436 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 FGRP09769 529 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 PDHBP11177 359 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
USP11-210ENST00000489030 CPT1AP50416 773 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
USP11-210ENST00000489030 GDF6Q6KF10 455 aaPredicted RBP13.44□□□□□ -0.26
USP11-210ENST00000489030 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 RNF207Q6ZRF8 634 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 KAT2BQ92831 832 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 WNT8BQ93098 351 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 SLC9A7Q96T83 725 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 COL20A1Q9P218 1284 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
USP11-210ENST00000489030 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
USP11-210ENST00000489030 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
USP11-210ENST00000489030 NBNO60934 754 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 TXNP10599 105 aaKnown RBP13.43□□□□□ -0.26
USP11-210ENST00000489030 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
USP11-210ENST00000489030 PDE4DQ08499 809 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 CCDC62Q6P9F0 684 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 RETREG2Q8NC44 543 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 AFG1LQ8WV93 481 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 FAM227BQ96M60 508 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 C1QTNF1Q9BXJ1 281 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 TANC1Q9C0D5 1861 aa13.43□□□□□ -0.26
USP11-210ENST00000489030 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
USP11-210ENST00000489030 ADD3Q9UEY8 706 aaKnown RBP13.43□□□□□ -0.26
USP11-210ENST00000489030 RAD50Q92878 1312 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
USP11-210ENST00000489030 ACTN1P12814 892 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 RFC2P35250 354 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 HAND2P61296 217 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 ZNF543Q08ER8 600 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 HIC1Q14526 733 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 PTGISQ16647 500 aa13.42□□□□□ -0.26
USP11-210ENST00000489030 LY6KQ17RY6 165 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms