RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PPP1R16BQ96T49 567 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 ZNF552Q9H707 407 aaPredicted RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 TNFRSF12AQ9NP84 129 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.01□□□□□ -1.453e-27■■■■□ 23.4
SSR1-209ENST00000488834 TMEFF2Q9UIK5 374 aaPredicted RBP6.01□□□□□ -1.45
SSR1-209ENST00000488834 NUDT5Q9UKK9 219 aa6.01□□□□□ -1.45
SSR1-209ENST00000488834 C22orf46C9J442 243 aa6□□□□□ -1.45
SSR1-209ENST00000488834 F8W031 263 aaPredicted RBP6□□□□□ -1.45
SSR1-209ENST00000488834 NFIBO00712 420 aa6□□□□□ -1.45
SSR1-209ENST00000488834 APPP05067 770 aa6□□□□□ -1.45
SSR1-209ENST00000488834 BCL6P41182 706 aa6□□□□□ -1.45
SSR1-209ENST00000488834 ZC3H14Q6PJT7 736 aaKnown RBP6□□□□□ -1.45
SSR1-209ENST00000488834 CEP68Q76N32 757 aa6□□□□□ -1.45
SSR1-209ENST00000488834 TMC6Q7Z403 805 aa6□□□□□ -1.45
SSR1-209ENST00000488834 CCDC103Q8IW40 242 aa6□□□□□ -1.45
SSR1-209ENST00000488834 RCBTB1Q8NDN9 531 aa6□□□□□ -1.45
SSR1-209ENST00000488834 DCAF4Q8WV16 495 aa6□□□□□ -1.45
SSR1-209ENST00000488834 OSBP2Q969R2 916 aa6□□□□□ -1.45
SSR1-209ENST00000488834 PHF20Q9BVI0 1012 aa6□□□□□ -1.45
SSR1-209ENST00000488834 COA3Q9Y2R0 106 aaPredicted RBP6□□□□□ -1.45
SSR1-209ENST00000488834 BLACEA4D250 179 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 SRGAP3O43295 1099 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 ADCY3O60266 1144 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 PEX10O60683 326 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 DBHP09172 617 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 FAM153BP0C7A2 387 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
SSR1-209ENST00000488834 LSAMPQ13449 338 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 WWC2Q6AWC2 1192 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 DENND5AQ6IQ26 1287 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 RPTNQ6XPR3 784 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 POU5F2Q8N7G0 328 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 C1orf159Q96HA4 380 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 AP5M1Q9H0R1 490 aa5.99□□□□□ -1.45
SSR1-209ENST00000488834 ARID1BQ8NFD5 2236 aaPredicted RBP5.98□□□□□ -1.45
SSR1-209ENST00000488834 ZC3H12DA2A288 527 aaKnown RBP5.98□□□□□ -1.45
SSR1-209ENST00000488834 TCAF2A6NFQ2 919 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 HRKO00198 91 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 SEMA7AO75326 666 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 NTRK1P04629 796 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 LCP1P13796 627 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 FPR2P25090 351 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 VIPR1P32241 457 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 MAPKAPK2P49137 400 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 LONRF2Q1L5Z9 754 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 PLEKHN1Q494U1 663 aaPredicted RBP5.98□□□□□ -1.45
SSR1-209ENST00000488834 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
SSR1-209ENST00000488834 FAM209AQ5JX71 171 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 ZSWIM2Q8NEG5 633 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 THAP3Q8WTV1 239 aaPredicted RBP5.98□□□□□ -1.45
SSR1-209ENST00000488834 DPF3Q92784 378 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 PEX11GQ96HA9 241 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 MTA3Q9BTC8 594 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 MCOLN1Q9GZU1 580 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 RXFP1Q9HBX9 757 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 GPR27Q9NS67 375 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 CLDND1Q9NY35 253 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 KLHL14Q9P2G3 628 aa5.98□□□□□ -1.45
SSR1-209ENST00000488834 TEX51A0A1B0GUA7 166 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 PPP1R11O60927 126 aaPredicted RBP5.97□□□□□ -1.45
SSR1-209ENST00000488834 CAPNS1P04632 268 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 C8AP07357 584 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 GLI4P10075 376 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 YBX1P67809 324 aaKnown RBP5.97□□□□□ -1.45
SSR1-209ENST00000488834 MESP2Q0VG99 397 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 TESK1Q15569 626 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 ZNF124Q15973 351 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 DCP2Q8IU60 420 aaKnown RBP5.97□□□□□ -1.45
SSR1-209ENST00000488834 NETO2Q8NC67 525 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 DHRS4Q9BTZ2 278 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 SGPP1Q9BX95 441 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 FBLN5Q9UBX5 448 aa5.97□□□□□ -1.45
SSR1-209ENST00000488834 MYOCOSA0A1B0GUC4 107 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 ETV2O00321 342 aaPredicted RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 DGKIO75912 1065 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 RAP1GAPP47736 663 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 PRR5P85299 388 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 ZNF200P98182 395 aaPredicted RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 CBX2Q14781 532 aaPredicted RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 C2orf27AQ580R0 203 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 MROH9Q5TGP6 573 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 FOXB2Q5VYV0 432 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 KCNT2Q6UVM3 1135 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 RSPO2Q6UXX9 243 aaPredicted RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 MTDHQ86UE4 582 aaKnown RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 IFNL3Q8IZI9 196 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 PLEKHO2Q8TD55 490 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 ZFYVE21Q9BQ24 234 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 ALG1Q9BT22 464 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 MRPS23Q9Y3D9 190 aaKnown RBP5.96□□□□□ -1.46
SSR1-209ENST00000488834 NPFFR2Q9Y5X5 522 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 PTCH2Q9Y6C5 1203 aa5.96□□□□□ -1.46
SSR1-209ENST00000488834 H7BY64 318 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 ARNTLO00327 626 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 AQP7O14520 342 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 ZBTB7AO95365 584 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 GPR85P60893 370 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 DLG4P78352 724 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 NTRK3Q16288 839 aa5.95□□□□□ -1.46
SSR1-209ENST00000488834 KIZQ2M2Z5 673 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms