RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
NUP98-212ENST00000488828 FAM133AQ8N9E0 248 aa12.76□□□□□ -0.37
NUP98-212ENST00000488828 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
NUP98-212ENST00000488828 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
NUP98-212ENST00000488828 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
NUP98-212ENST00000488828 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
NUP98-212ENST00000488828 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
NUP98-212ENST00000488828 CCDC196A0A1B0GTZ2 297 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 DPYSL4O14531 572 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 CYTH3O43739 400 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 MSCO60682 206 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 CYBAP13498 195 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 SMARCA1P28370 1054 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 HTTP42858 3142 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 RGS19P49795 217 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 METAP2P50579 478 aaKnown RBP eCLIP12.75□□□□□ -0.37
NUP98-212ENST00000488828 SLC30A10Q6XR72 485 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 ARMCX2Q7L311 632 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 TBC1D5Q92609 795 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 TM6SF1Q9BZW5 370 aa12.75□□□□□ -0.37
NUP98-212ENST00000488828 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
NUP98-212ENST00000488828 DDX20Q9UHI6 824 aaKnown RBP12.75□□□□□ -0.37
NUP98-212ENST00000488828 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 SEPT4O43236 478 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 FARP2O94887 1054 aaPredicted RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 SNAI1O95863 264 aaPredicted RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 PDE4DQ08499 809 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 SLC35G1Q2M3R5 365 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 TMTC3Q6ZXV5 915 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 MTMR8Q96EF0 704 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
NUP98-212ENST00000488828 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 ZNFX1Q9P2E3 1918 aaKnown RBP12.74□□□□□ -0.37
NUP98-212ENST00000488828 GCOM1H8Y6P7 765 aaPredicted RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 POLR2MP0CAP2 368 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 RARBP10826 455 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 CAPN2P17655 700 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 ANAPC15P60006 121 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 AKAP17AQ02040 695 aaKnown RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 ARRDC4Q8NCT1 418 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
NUP98-212ENST00000488828 CENPFP49454 3210 aa12.73□□□□□ -0.37
NUP98-212ENST00000488828 AKR1A1P14550 325 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 ALDH5A1P51649 535 aaPredicted RBP12.72□□□□□ -0.37
NUP98-212ENST00000488828 NEK4P51957 841 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 STK3Q13188 491 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 CCDC144BQ3MJ40 725 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 C8orf34Q49A92 452 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
NUP98-212ENST00000488828 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
NUP98-212ENST00000488828 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
NUP98-212ENST00000488828 DPF3Q92784 378 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 CUL5Q93034 780 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 SHISA4Q96DD7 197 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 PAWRQ96IZ0 340 aaKnown RBP12.72□□□□□ -0.37
NUP98-212ENST00000488828 FGD4Q96M96 766 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 XPNPEP3Q9NQH7 507 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
NUP98-212ENST00000488828 CPLX1O14810 134 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 PPFIA3O75145 1194 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 IGHA2P01877 340 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 ZNF865P0CJ78 1059 aaPredicted RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 CDC27P30260 824 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 FBXL16Q8N461 479 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
NUP98-212ENST00000488828 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
NUP98-212ENST00000488828 DNERQ8NFT8 737 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms