RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
HLA-DPB1-216ENST00000488575 TLR9Q9NR96 1032 aa15.04■□□□□ -0
HLA-DPB1-216ENST00000488575 TLR7Q9NYK1 1049 aaKnown RBP15.04■□□□□ -0
HLA-DPB1-216ENST00000488575 NYAP2Q9P242 653 aa15.04■□□□□ -0
HLA-DPB1-216ENST00000488575 FEM1BQ9UK73 627 aa15.04■□□□□ -0
HLA-DPB1-216ENST00000488575 CHD8Q9HCK8 2581 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 CFAP47Q6ZTR5 3102 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 RAD50Q92878 1312 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 RBM47A0AV96 593 aaKnown RBP15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 A6NJR5 290 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 LOC730098B7Z3J9 87 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 PDE6AP16499 860 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 PTGISQ16647 500 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 SESTD1Q86VW0 696 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 MRS2Q9HD23 443 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 RNF146Q9NTX7 359 aa15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 DDX49Q9Y6V7 483 aaKnown RBP15.03■□□□□ -0
HLA-DPB1-216ENST00000488575 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 TBX10O75333 385 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 EYA4O95677 639 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 GNAI2P04899 355 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 POLA2Q14181 598 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 TTF1Q15361 905 aaPredicted RBP15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 TKFCQ3LXA3 575 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 SLC9C2Q5TAH2 1124 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 FAM117BQ6P1L5 589 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 FBXO11Q86XK2 927 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 WDR11Q9BZH6 1224 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 SYNPO2Q9UMS6 1093 aa15.02■□□□□ -0
HLA-DPB1-216ENST00000488575 TCRBV5S4A2TA0A5A2 114 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 E9PSI1 815 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CLUL1Q15846 466 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 TMEM192Q8IY95 271 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 OR6J1Q8NGC5 347 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 DHX38Q92620 1227 aaKnown RBP15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CYP39A1Q9NYL5 469 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CD207Q9UJ71 328 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CEP250Q9BV73 2442 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 FRYLO94915 3013 aa15.01□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ZNF532Q9HCE3 1301 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CYP2D7A0A087X1C5 515 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MED19A0JLT2 244 aaPredicted RBP15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 NKRFO15226 690 aaKnown RBP eCLIP15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 AMHP03971 560 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CKBP12277 381 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 HYAL1Q12794 435 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 OS9Q13438 667 aaPredicted RBP15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 PPP1R13LQ8WUF5 828 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 LMAN2LQ9H0V9 348 aa15□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 GDF6Q6KF10 455 aaPredicted RBP14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 NKD2Q969F2 451 aaPredicted RBP14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MKL1Q969V6 931 aa14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MSLNLQ96KJ4 702 aa14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 TRERF1Q96PN7 1200 aa14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
HLA-DPB1-216ENST00000488575 C5orf67F2Z3F1 127 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 PRKAB2O43741 272 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 KDM4AO75164 1064 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 LGR5O75473 907 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 TRAF7Q6Q0C0 670 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MYOCDQ8IZQ8 938 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ADSSL1Q8N142 457 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 SMRP1Q8NCR6 262 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 GMCL1P1Q8NEA9 526 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 SSH3Q8TE77 659 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
HLA-DPB1-216ENST00000488575 EMSYQ7Z589 1322 aa14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ATRXP46100 2492 aa14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ICAM3P32942 547 aa14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 MBTPS1Q14703 1052 aa14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 PPP2R5BQ15173 497 aa14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 NOP58Q9Y2X3 529 aaKnown RBP14.97□□□□□ -0.01
HLA-DPB1-216ENST00000488575 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 SURF6O75683 361 aaKnown RBP14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 RB1P06400 928 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ALAS1P13196 640 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 RASA1P20936 1047 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ALDH5A1P51649 535 aaPredicted RBP14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 STAT2P52630 851 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 COASYQ13057 564 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 ADAM15Q13444 863 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 YME1L1Q96TA2 773 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 C11orf84Q9BUA3 381 aaPredicted RBP14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 GTF2IRD1Q9UHL9 959 aa14.96□□□□□ -0.01
HLA-DPB1-216ENST00000488575 PKD1L2Q7Z442 2459 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms