RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 DCAF4Q8WV16 495 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 PLCD4Q9BRC7 762 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 TNFRSF12AQ9NP84 129 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 GPR27Q9NS67 375 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 SIRT5Q9NXA8 310 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.48□□□□□ -1.37
ITGB1-214ENST00000488427 PFDN2Q9UHV9 154 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 KDM2BQ8NHM5 1336 aa6.48□□□□□ -1.37
ITGB1-214ENST00000488427 C7orf72A4D263 438 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 TBX1O43435 398 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 TMEM253P0C7T8 217 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 MVKQ03426 396 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 BMS1Q14692 1282 aaKnown RBP6.47□□□□□ -1.37
ITGB1-214ENST00000488427 SLC9A5Q14940 896 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 SLC35F1Q5T1Q4 408 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 ZNF605Q86T29 641 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 ZSCAN18Q8TBC5 510 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-214ENST00000488427 ZNF552Q9H707 407 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-214ENST00000488427 ARHGEF4Q9NR80 690 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 CDK11AQ9UQ88 783 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-214ENST00000488427 NUB1Q9Y5A7 615 aa6.47□□□□□ -1.37
ITGB1-214ENST00000488427 TRBV23-1A0A0A0MS06 115 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-214ENST00000488427 NFIBO00712 420 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 MAFKO60675 156 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 ZBTB7AO95365 584 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 MAPKAPK2P49137 400 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 SPATC1Q76KD6 591 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 MAMDC2Q7Z304 686 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-214ENST00000488427 TMEM169Q96HH4 297 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 CHAMP1Q96JM3 812 aa6.46□□□□□ -1.38
ITGB1-214ENST00000488427 TEX51A0A1B0GUA7 166 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 H7BY64 318 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 AQP7O14520 342 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 TSPAN15O95858 294 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 YBX1P67809 324 aaKnown RBP6.45□□□□□ -1.38
ITGB1-214ENST00000488427 LSAMPQ13449 338 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 CBX2Q14781 532 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-214ENST00000488427 WWC2Q6AWC2 1192 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 ZC3H14Q6PJT7 736 aaKnown RBP6.45□□□□□ -1.38
ITGB1-214ENST00000488427 PANK1Q8TE04 598 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 TRMT2BQ96GJ1 504 aaKnown RBP6.45□□□□□ -1.38
ITGB1-214ENST00000488427 DNAJC7Q99615 494 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 ALG1Q9BT22 464 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 LNPKQ9C0E8 428 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 GULP1Q9UBP9 304 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
ITGB1-214ENST00000488427 NUDT19A8MXV4 375 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 DLX3O60479 287 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 EFCAB14O75071 495 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 FUCA1P04066 466 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 CAPNS1P04632 268 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 DBHP09172 617 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 TACR1P25103 407 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 CFPP27918 469 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 GABREP78334 506 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 TARBP2Q15633 366 aaKnown RBP6.44□□□□□ -1.38
ITGB1-214ENST00000488427 KIZQ2M2Z5 673 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 CCDC144BQ3MJ40 725 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 RIOX2Q8IUF8 465 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 IFNL3Q8IZI9 196 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 KREMEN2Q8NCW0 462 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.44□□□□□ -1.38
ITGB1-214ENST00000488427 PTPRN2Q92932 1015 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 DHRS4Q9BTZ2 278 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 KRTAP4-11Q9BYQ6 195 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 BTG4Q9NY30 223 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 MARCH2Q9P0N8 246 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 NPFFR2Q9Y5X5 522 aa6.44□□□□□ -1.38
ITGB1-214ENST00000488427 RIMBP3CA6NJZ7 1639 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 RIMBP3BA6NNM3 1639 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 RIMBP3Q9UFD9 1639 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 FAM221BA6H8Z2 402 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 TCAF2A6NFQ2 919 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 C22orf46C9J442 243 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 ADCY3O60266 1144 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 DGKIO75912 1065 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 PFKLP17858 780 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 GLDCP23378 1020 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 GRIA2P42262 883 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 SLC6A11P48066 632 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 CEBPAP49715 358 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-214ENST00000488427 GPR85P60893 370 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
ITGB1-214ENST00000488427 PRSS53Q2L4Q9 553 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 C2orf27AQ580R0 203 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 TAF7LQ5H9L4 462 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 STYK1Q6J9G0 422 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 SYDE1Q6ZW31 735 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-214ENST00000488427 ANKLE2Q86XL3 938 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
ITGB1-214ENST00000488427 LRRC56Q8IYG6 542 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-214ENST00000488427 SYNPOQ8N3V7 929 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms