RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
HLA-DOB-209ENST00000488325 CXXC1Q9P0U4 656 aaPredicted RBP13.82□□□□□ -0.2
HLA-DOB-209ENST00000488325 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
HLA-DOB-209ENST00000488325 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 IGFBP4P22692 258 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 KRT2P35908 639 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 IRX3P78415 501 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 GPR142Q7Z601 462 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 GMCL1Q96IK5 515 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 SPATA32Q96LK8 384 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 PORCNQ9H237 461 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 VPS54Q9P1Q0 977 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 ISY1Q9ULR0 285 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 ELP1O95163 1332 aa13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
HLA-DOB-209ENST00000488325 F5H6K3 240 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 RAD21O60216 631 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 NLRP5P59047 1200 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 KLRC3Q07444 240 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 MYSM1Q5VVJ2 828 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 PLEKHH3Q7Z736 793 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 C11orf16Q9NQ32 467 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 KCNJ14Q9UNX9 436 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 TMX2Q9Y320 296 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 REV3LO60673 3130 aa13.8□□□□□ -0.2
HLA-DOB-209ENST00000488325 hCG_1642624A0A1W2PR95 340 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 KBTBD13C9JR72 458 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 CYTH3O43739 400 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 GPR37L1O60883 481 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 NDUFB10O96000 172 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 KCNQ1P51787 676 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 UBE2HP62256 183 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 JAG1P78504 1218 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 TFF2Q03403 129 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 KLHL40Q2TBA0 621 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 FAM173BQ6P4H8 233 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 GDPD2Q9HCC8 539 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 BARHL2Q9NY43 387 aa13.79□□□□□ -0.2
HLA-DOB-209ENST00000488325 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 FAM86C2PA6NEL3 165 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 KIF28PB7ZC32 967 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 YEATS4O95619 227 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 BMP3P12645 472 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 PBX2P40425 430 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 HERVK_113P62684 666 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 TLE2Q04725 743 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 FPGSQ05932 587 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 Q3C1V9 767 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 PPP1R18Q6NYC8 613 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 KCTD1Q719H9 257 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 HEATR3Q7Z4Q2 680 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 FEZ1Q99689 392 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 RNF39Q9H2S5 420 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 AS3MTQ9HBK9 375 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 VAT1LQ9HCJ6 419 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 RBPJLQ9UBG7 517 aa13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 NOL7Q9UMY1 257 aaKnown RBP13.78□□□□□ -0.2
HLA-DOB-209ENST00000488325 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 STXBP3O00186 592 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 RAG1P15918 1043 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 GNA11P29992 359 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 NAPAP54920 295 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 ERVK-9P63128 1117 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 ERVK-24P63145 666 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 IKQ13123 557 aaPredicted RBP13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 STK38Q15208 465 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms