RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 ENAHQ8N8S7 591 aaPredicted RBP17.91■□□□□ 0.46
TRIM50-203ENST00000488217 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
TRIM50-203ENST00000488217 PARP1P09874 1014 aaKnown RBP17.9■□□□□ 0.46
TRIM50-203ENST00000488217 CYP2C9P11712 490 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 TTLL4Q14679 1199 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 RAB30Q15771 203 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
TRIM50-203ENST00000488217 ASPRV1Q53RT3 343 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
TRIM50-203ENST00000488217 NSUN6Q8TEA1 469 aaKnown RBP17.9■□□□□ 0.46
TRIM50-203ENST00000488217 COPS5Q92905 334 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 TAAR1Q96RJ0 339 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 JMJD4Q9H9V9 463 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 TNKSO95271 1327 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 ABCB11O95342 1321 aa17.9■□□□□ 0.46
TRIM50-203ENST00000488217 VCANP13611 3396 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 NFRKBQ6P4R8 1299 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 CCDC62Q6P9F0 684 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 VWCEQ96DN2 955 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 SCLYQ96I15 445 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 IWS1Q96ST2 819 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 MRPL11Q9Y3B7 192 aaKnown RBP17.89■□□□□ 0.45
TRIM50-203ENST00000488217 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 RAD50Q92878 1312 aa17.89■□□□□ 0.45
TRIM50-203ENST00000488217 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
TRIM50-203ENST00000488217 PTPN11Q06124 597 aaPredicted RBP17.88■□□□□ 0.45
TRIM50-203ENST00000488217 STXBP2Q15833 593 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 QRICH1Q2TAL8 776 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 FAM47CQ5HY64 1035 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 SEPT14Q6ZU15 432 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 RMDN3Q96TC7 470 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 UBAC1Q9BSL1 405 aa17.88■□□□□ 0.45
TRIM50-203ENST00000488217 ARIH2O95376 493 aa17.87■□□□□ 0.45
TRIM50-203ENST00000488217 IFIT1BQ5T764 474 aaKnown RBP17.87■□□□□ 0.45
TRIM50-203ENST00000488217 RETREG2Q8NC44 543 aa17.87■□□□□ 0.45
TRIM50-203ENST00000488217 GAS2L1Q99501 681 aaPredicted RBP17.87■□□□□ 0.45
TRIM50-203ENST00000488217 PRDM12Q9H4Q4 367 aa17.87■□□□□ 0.45
TRIM50-203ENST00000488217 SLC28A3Q9HAS3 691 aa17.87■□□□□ 0.45
TRIM50-203ENST00000488217 COL20A1Q9P218 1284 aa17.87■□□□□ 0.45
TRIM50-203ENST00000488217 EIF3JO75822 258 aaKnown RBP17.86■□□□□ 0.45
TRIM50-203ENST00000488217 PFKMP08237 780 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 LY6KQ17RY6 165 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 ARHGEF16Q5VV41 709 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 PPP1R13LQ8WUF5 828 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 AFG1LQ8WV93 481 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 AMNQ9BXJ7 453 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 NKX2-4Q9H2Z4 354 aa17.86■□□□□ 0.45
TRIM50-203ENST00000488217 YBX2Q9Y2T7 364 aaKnown RBP17.86■□□□□ 0.45
TRIM50-203ENST00000488217 KLRF2D3W0D1 207 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 GH1P01241 217 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 IQCF3P0C7M6 154 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
TRIM50-203ENST00000488217 RFC2P35250 354 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 RABGGTBP53611 331 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 CHMP4BP1P59074 171 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 DEFB128Q7Z7B8 93 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 STAG2Q8N3U4 1231 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 USP38Q8NB14 1042 aa17.85■□□□□ 0.45
TRIM50-203ENST00000488217 SYMPKQ92797 1274 aaKnown RBP17.85■□□□□ 0.45
TRIM50-203ENST00000488217 DDX41Q9UJV9 622 aaKnown RBP17.85■□□□□ 0.45
TRIM50-203ENST00000488217 MCM3APO60318 1980 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 ZBBXA8MT70 800 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 NR3C2P08235 984 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 PDE4AP27815 886 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 ARHGAP1Q07960 439 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 TRDNQ13061 729 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 BFSP2Q13515 415 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 SEC23AQ15436 765 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 PPM1EQ8WY54 764 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 IL25Q9H293 177 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 MAP3K20Q9NYL2 800 aaKnown RBP17.84■□□□□ 0.45
TRIM50-203ENST00000488217 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
TRIM50-203ENST00000488217 PCDHA11Q9Y5I1 949 aa17.84■□□□□ 0.45
TRIM50-203ENST00000488217 PALM3A6NDB9 673 aaPredicted RBP17.83■□□□□ 0.44
TRIM50-203ENST00000488217 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 CFBP00751 764 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 ACTN1P12814 892 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 MYOGP15173 224 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 ATP2A2P16615 1042 aaKnown RBP17.83■□□□□ 0.44
TRIM50-203ENST00000488217 LAMC2Q13753 1193 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 ADGRE1Q14246 886 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 PTGISQ16647 500 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 TTC22Q5TAA0 569 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 PXMP2Q9NR77 195 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 NOD1Q9Y239 953 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 PCDHA1Q9Y5I3 950 aa17.83■□□□□ 0.44
TRIM50-203ENST00000488217 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
TRIM50-203ENST00000488217 ZBTB5O15062 677 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 EIF2AK2P19525 551 aaKnown RBP17.82■□□□□ 0.44
TRIM50-203ENST00000488217 IGFBP4P22692 258 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 HSD17B4P51659 736 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 DGKDQ16760 1214 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 STOX1Q6ZVD7 989 aa17.82■□□□□ 0.44
TRIM50-203ENST00000488217 PHOSPHO2Q8TCD6 241 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms