RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 KAT14Q9H8E8 782 aa19.91■□□□□ 0.78
ITSN1-230ENST00000488166 DHX16O60231 1041 aaKnown RBP19.9■□□□□ 0.78
ITSN1-230ENST00000488166 KDM4AO75164 1064 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 TXNP10599 105 aaKnown RBP19.9■□□□□ 0.78
ITSN1-230ENST00000488166 RABGGTBP53611 331 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 NBPF20Q3BBV1 942 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 CCDC178Q5BJE1 867 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 CHD1LQ86WJ1 897 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 DGKHQ86XP1 1220 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 PNMA1Q8ND90 353 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 PPP1R13LQ8WUF5 828 aa19.9■□□□□ 0.78
ITSN1-230ENST00000488166 KPNA6O60684 536 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 AAMPQ13685 434 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 TTLL4Q14679 1199 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 CCDC85BQ15834 202 aaPredicted RBP19.89■□□□□ 0.77
ITSN1-230ENST00000488166 CDC37Q16543 378 aaPredicted RBP19.89■□□□□ 0.77
ITSN1-230ENST00000488166 TJAP1Q5JTD0 557 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 SMC5Q8IY18 1101 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 PRDM6Q9NQX0 595 aa19.89■□□□□ 0.77
ITSN1-230ENST00000488166 YBX2Q9Y2T7 364 aaKnown RBP19.89■□□□□ 0.77
ITSN1-230ENST00000488166 ABCB11O95342 1321 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 B4E1Z4 1266 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 PFKMP08237 780 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 EDNRBP24530 442 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 PPP2R2DQ66LE6 453 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 PLEKHM2Q8IWE5 1019 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 NOD1Q9Y239 953 aa19.88■□□□□ 0.77
ITSN1-230ENST00000488166 HIP1O00291 1037 aa19.87■□□□□ 0.77
ITSN1-230ENST00000488166 ACTN1P12814 892 aa19.87■□□□□ 0.77
ITSN1-230ENST00000488166 ATP2A2P16615 1042 aaKnown RBP19.87■□□□□ 0.77
ITSN1-230ENST00000488166 ADGRF4Q8IZF3 695 aa19.87■□□□□ 0.77
ITSN1-230ENST00000488166 RETREG2Q8NC44 543 aa19.87■□□□□ 0.77
ITSN1-230ENST00000488166 RGS22Q8NE09 1264 aa19.87■□□□□ 0.77
ITSN1-230ENST00000488166 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
ITSN1-230ENST00000488166 A6NJR5 290 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 ARIH2O95376 493 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 MYOGP15173 224 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 NT5C2P49902 561 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 NUCB1Q02818 461 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 ADGRE1Q14246 886 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 IMMTQ16891 758 aaKnown RBP19.86■□□□□ 0.77
ITSN1-230ENST00000488166 ASPRV1Q53RT3 343 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 SEPT14Q6ZU15 432 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 TBC1D5Q92609 795 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 TAAR1Q96RJ0 339 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 ZSCAN10Q96SZ4 725 aaPredicted RBP19.86■□□□□ 0.77
ITSN1-230ENST00000488166 FTOQ9C0B1 505 aaKnown RBP eCLIP19.86■□□□□ 0.77
ITSN1-230ENST00000488166 OSBPL3Q9H4L5 887 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 VAT1LQ9HCJ6 419 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 THEGQ9P2T0 379 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 PCDHA11Q9Y5I1 949 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 CHD9Q3L8U1 2897 aa19.86■□□□□ 0.77
ITSN1-230ENST00000488166 IGHDP01880 384 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 PARP1P09874 1014 aaKnown RBP19.85■□□□□ 0.77
ITSN1-230ENST00000488166 CHST3Q7LGC8 479 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 FBXO11Q86XK2 927 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 MCF2L2Q86YR7 1114 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 MICALL1Q8N3F8 863 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 NSUN6Q8TEA1 469 aaKnown RBP19.85■□□□□ 0.77
ITSN1-230ENST00000488166 ZSWIM5Q9P217 1185 aa19.85■□□□□ 0.77
ITSN1-230ENST00000488166 RFC2P35250 354 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 PTPN11Q06124 597 aaPredicted RBP19.84■□□□□ 0.77
ITSN1-230ENST00000488166 BFSP2Q13515 415 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 LY6KQ17RY6 165 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 QRICH1Q2TAL8 776 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 ARHGEF16Q5VV41 709 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 ENAHQ8N8S7 591 aaPredicted RBP19.84■□□□□ 0.77
ITSN1-230ENST00000488166 SYTL5Q8TDW5 730 aaPredicted RBP19.84■□□□□ 0.77
ITSN1-230ENST00000488166 RMDN3Q96TC7 470 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 UBAC1Q9BSL1 405 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 DSCC1Q9BVC3 393 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 KRT23Q9C075 422 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 CTNNA3Q9UI47 895 aa19.84■□□□□ 0.77
ITSN1-230ENST00000488166 MRPL11Q9Y3B7 192 aaKnown RBP19.84■□□□□ 0.77
ITSN1-230ENST00000488166 PITPNM1O00562 1244 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 GH1P01241 217 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 IQCF3P0C7M6 154 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 STXBP2Q15833 593 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 TMEM67Q5HYA8 995 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 TET1Q8NFU7 2136 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 AFG1LQ8WV93 481 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
ITSN1-230ENST00000488166 ANKS1AQ92625 1134 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 VWCEQ96DN2 955 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 CNNM2Q9H8M5 875 aa19.83■□□□□ 0.77
ITSN1-230ENST00000488166 PTPRSQ13332 1948 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 CFBP00751 764 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 MMP3P08254 477 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 EIF2AK2P19525 551 aaKnown RBP19.82■□□□□ 0.76
ITSN1-230ENST00000488166 PTGISQ16647 500 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 IFIT1BQ5T764 474 aaKnown RBP19.82■□□□□ 0.76
ITSN1-230ENST00000488166 CCDC62Q6P9F0 684 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 CCDC155Q8N6L0 562 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 IL27Q8NEV9 243 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 IWS1Q96ST2 819 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 MAF1Q9H063 256 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 TSPYL2Q9H2G4 693 aaPredicted RBP19.82■□□□□ 0.76
ITSN1-230ENST00000488166 COL20A1Q9P218 1284 aa19.82■□□□□ 0.76
ITSN1-230ENST00000488166 CHD7Q9P2D1 2997 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms