RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 OVOS2A0A0G2JMS6 1433 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 OVOS2A0A0J9YW53 1432 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 OVOS2Q6IE36 1432 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 KDRP35968 1356 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 MAP2P11137 1827 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 NEURL1BA8MQ27 555 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 C2CD2LO14523 706 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 SCAMP3O14828 347 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 FYB1O15117 783 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 MEFVO15553 781 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 APBA3O96018 575 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 MCM3P25205 808 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 IRAK1P51617 712 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 NLRP12P59046 1061 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 ATP8B2P98198 1209 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 DRP2Q13474 957 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 NECTIN1Q15223 517 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 ADCK5Q3MIX3 580 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 CDCA2Q69YH5 1023 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 NAA16Q6N069 864 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 BRAPQ7Z569 592 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 CCDC50Q8IVM0 306 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 CNTROBQ8N137 903 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 NECAB1Q8N987 351 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 IGSF22Q8N9C0 903 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 FAM76AQ8TAV0 307 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 PHACTR3Q96KR7 559 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 SH3GL2Q99962 352 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 VCPKMTQ9H867 229 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 KAT14Q9H8E8 782 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 SUGCTQ9HAC7 445 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPATS2LQ9NUQ6 558 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 ERCC6L2Q5T890 1561 aa5.36□□□□□ -1.55
CDC42BPA-213ENST00000488131 SRRM3A6NNA2 597 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 ELL2O00472 640 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 RAB11FIP3O75154 756 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 IPO7O95373 1038 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CPA1P15085 419 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 ACPPP15309 386 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 HOXB4P17483 251 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CES1P23141 567 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 PSMA5P28066 241 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CHRNA4P43681 627 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 DGKGP49619 791 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CCNHP51946 323 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPEM2Q0P670 501 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 TRAF1Q13077 416 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 SLC5A9Q2M3M2 681 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 FAM182BQ5T319 152 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 TTC19Q6DKK2 380 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 NXPE4Q6UWF7 544 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 ARHGEF25Q86VW2 580 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 OR13H1Q8NG92 308 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 COG1Q8WTW3 980 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 MRPS27Q92552 414 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 C12orf49Q9H741 205 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 HOMER3Q9NSC5 361 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 MARK1Q9P0L2 795 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 SALL4Q9UJQ4 1053 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 CAPN7Q9Y6W3 813 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 LRRC37A3O60309 1634 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 AGLP35573 1532 aa5.35□□□□□ -1.55
CDC42BPA-213ENST00000488131 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CHL1O00533 1208 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PFKFB2O60825 505 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPATA31C1P0DKV0 1188 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 MYBL2P10244 700 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 ZKSCAN1P17029 563 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 NFKB1P19838 968 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 ALAS2P22557 587 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PIP4K2BP78356 416 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 LAMC2Q13753 1193 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 GRM2Q14416 872 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PDCD2Q16342 344 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 RSPO4Q2I0M5 234 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PRRT3Q5FWE3 981 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CEP85LQ5SZL2 805 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 TTC39BQ5VTQ0 682 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 WWC2Q6AWC2 1192 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 TOGARAM2Q6ZUX3 1019 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CHSY3Q70JA7 882 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 FSIP1Q8NA03 581 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 GLIS3Q8NEA6 775 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 SMARCC2Q8TAQ2 1214 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 SSH3Q8TE77 659 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PSMD1Q99460 953 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CAPS2Q9BXY5 557 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 BCO2Q9BYV7 579 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CD248Q9HCU0 757 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 BATF3Q9NR55 127 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 KLC4Q9NSK0 619 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 SPG7Q9UQ90 795 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 DLC1Q96QB1 1528 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 ARID1BQ8NFD5 2236 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 PNMA6EA0A0J9YXQ4 647 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 A0A1W2PP55 124 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 CTAGE15A4D2H0 777 aa5.34□□□□□ -1.55
CDC42BPA-213ENST00000488131 MYO1FO00160 1098 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms