RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 TMEM87AQ8NBN3 555 aa12.03□□□□□ -0.48
HLA-DMB-261ENST00000487996 TXNRD2Q9NNW7 524 aa12.03□□□□□ -0.48
HLA-DMB-261ENST00000487996 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
HLA-DMB-261ENST00000487996 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
HLA-DMB-261ENST00000487996 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-261ENST00000487996 LAD1O00515 517 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 TAL1P17542 331 aaPredicted RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 ERCC3P19447 782 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 ATP2B1P20020 1258 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 MCM4P33991 863 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 TOB1P50616 345 aaPredicted RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 KCTD2Q14681 263 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 LETM2Q2VYF4 491 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 A1CFQ9NQ94 594 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 CYP39A1Q9NYL5 469 aa12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-261ENST00000487996 MYH7BA7E2Y1 1941 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 GOLGA6L4A6NEF3 574 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 B4DLN1 442 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 CA12O43570 354 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 STRNO43815 780 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 TLR2O60603 784 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 FCER1AP12319 257 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 MAPK4P31152 587 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 ARHGAP4P98171 946 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 CEBPZQ03701 1054 aaKnown RBP12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 SLC39A14Q15043 492 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 XRRA1Q6P2D8 792 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 LINC00301Q8NCQ3 95 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 SYTL5Q8TDW5 730 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 LEO1Q8WVC0 666 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 RCOR1Q9UKL0 485 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 IVNS1ABPQ9Y6Y0 642 aa12.01□□□□□ -0.49
HLA-DMB-261ENST00000487996 ADAMTS3O15072 1205 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 SPTLC2O15270 562 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 CCNT1O60563 726 aaKnown RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 PPP6R2O75170 966 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 CYP3A4P08684 503 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 BAATQ14032 418 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 WDR78Q5VTH9 848 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 SLC30A10Q6XR72 485 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 TNS4Q8IZW8 715 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 NSUN6Q8TEA1 469 aaKnown RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 TBC1D5Q92609 795 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 RMDN3Q96TC7 470 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ADD3Q9UEY8 706 aaKnown RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 PCDHB6Q9Y5E3 794 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 CLIC4Q9Y696 253 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ADGRA2Q96PE1 1338 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 NEMFO60524 1076 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 MCM7P33993 719 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZNF76P36508 570 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ME1P48163 572 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 Q3C1V9 767 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 ARL6IP4Q66PJ3 421 aaKnown RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-261ENST00000487996 CRYGNQ8WXF5 182 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 PGBD1Q96JS3 809 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 MMP19Q99542 508 aa12□□□□□ -0.49
HLA-DMB-261ENST00000487996 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 LOC102724159A0A0B4J2E5 919 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 BCRP11274 1271 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 CYP3A7P24462 503 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 CIITAP33076 1130 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 ATP2C1P98194 919 aaPredicted RBP11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 SETQ01105 290 aaPredicted RBP11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 PTPAQ15257 358 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 PWP2Q15269 919 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZNF174Q15697 407 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 PCNX4Q63HM2 1172 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 C17orf99Q6UX52 265 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 IWS1Q96ST2 819 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-261ENST00000487996 AOC2O75106 756 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 STAM2O75886 525 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 PRPHP41219 470 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 UBE2HP62256 183 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 PTGDRQ13258 359 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 CRHR2Q13324 411 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 NBR1Q14596 966 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 NFKBIBQ15653 356 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 KRI1Q8N9T8 703 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms