RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 hCG_1642624A0A1W2PR95 340 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 DYNC1LI2O43237 492 aaPredicted RBP16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 EIF2AK2P19525 551 aaKnown RBP16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 ACLYP53396 1101 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 TMEM63BQ5T3F8 832 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 SLC39A5Q6ZMH5 540 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 TLK2Q86UE8 772 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 AP5M1Q9H0R1 490 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
PFKFB3-213ENST00000487989 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 RBM47A0AV96 593 aaKnown RBP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 PTGS1P23219 599 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 RCAN1P53805 252 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 STXBP2Q15833 593 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 CCSAPQ6IQ19 270 aaPredicted RBP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 PCSK9Q8NBP7 692 aaKnown RBP16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 TM6SF1Q9BZW5 370 aa16.35■□□□□ 0.21
PFKFB3-213ENST00000487989 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 MOXD2PA6NHM9 499 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 CTAGE5O15320 804 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 ASGR1P07306 291 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 NR3C2P08235 984 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 CDC27P30260 824 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 RTP1P59025 263 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 NKX3-2P78367 333 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 BEX3Q00994 111 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 PPP2R5BQ15173 497 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 FAM217BQ9NTX9 383 aaPredicted RBP16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 ZMYND8Q9ULU4 1186 aaPredicted RBP16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 ATP11BQ9Y2G3 1177 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 Q9Y3F1 56 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 CEP290O15078 2479 aa16.34■□□□□ 0.21
PFKFB3-213ENST00000487989 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 TXNP10599 105 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 SYN1P17600 705 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 FUT2Q10981 343 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 SEPT14Q6ZU15 432 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 CUL5Q93034 780 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 PDCD2LQ9BRP1 358 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
PFKFB3-213ENST00000487989 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 TOB2Q14106 344 aaPredicted RBP16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 PGM5Q15124 567 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 USP17L6PQ6QN14 398 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 ALPK3Q96L96 1907 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 STARD7Q9NQZ5 370 aa16.32■□□□□ 0.2
PFKFB3-213ENST00000487989 PIK3CDO00329 1044 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 MEIS2O14770 477 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 ZEB2O60315 1214 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 ARIH2O95376 493 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 EVCP57679 992 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 SNX17Q15036 470 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 C1orf53Q5VUE5 145 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 VSIG10LQ86VR7 867 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 COPS5Q92905 334 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
PFKFB3-213ENST00000487989 ELP1O95163 1332 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 SEC24BO95487 1268 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 CCND2P30279 289 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 ANAPC15P60006 121 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 TLE2Q04725 743 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 LY6KQ17RY6 165 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 COLQQ9Y215 455 aaPredicted RBP16.3■□□□□ 0.2
PFKFB3-213ENST00000487989 NID2Q14112 1375 aa16.29■□□□□ 0.2
PFKFB3-213ENST00000487989 CABYRO75952 493 aa16.29■□□□□ 0.2
PFKFB3-213ENST00000487989 CPT1AP50416 773 aa16.29■□□□□ 0.2
PFKFB3-213ENST00000487989 NAPAP54920 295 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms