RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	AKR1A1	P14550	325 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	HOXA13	P31271	388 aa	Predicted RBP	32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	PDE4D	Q08499	809 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ME3	Q16798	604 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ARHGEF16	Q5VV41	709 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	SMARCC2	Q8TAQ2	1214 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ZSCAN31	Q96LW9	406 aa	Predicted RBP	32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	VTA1	Q9NP79	307 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	FAM184B	Q9ULE4	1060 aa		32.19	■■■□□ 2.74
PPP1R35-204	ENST00000487452	STXBP3	O00186	592 aa		32.18	■■■□□ 2.74
PPP1R35-204	ENST00000487452	PKN1	Q16512	942 aa		32.18	■■■□□ 2.74
PPP1R35-204	ENST00000487452	LHX8	Q68G74	356 aa		32.18	■■■□□ 2.74
PPP1R35-204	ENST00000487452	PXMP2	Q9NR77	195 aa		32.18	■■■□□ 2.74
PPP1R35-204	ENST00000487452	GTF3C6	Q969F1	213 aa		32.17	■■■□□ 2.74
PPP1R35-204	ENST00000487452	KATNBL1	Q9H079	304 aa		32.17	■■■□□ 2.74
PPP1R35-204	ENST00000487452	OGDHL	Q9ULD0	1010 aa		32.17	■■■□□ 2.74
PPP1R35-204	ENST00000487452	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.17	■■■□□ 2.74
PPP1R35-204	ENST00000487452	MEIS2	O14770	477 aa		32.16	■■■□□ 2.74
PPP1R35-204	ENST00000487452	DEXI	O95424	95 aa		32.16	■■■□□ 2.74
PPP1R35-204	ENST00000487452	EN2	P19622	333 aa	Predicted RBP	32.16	■■■□□ 2.74
PPP1R35-204	ENST00000487452	FCHSD1	Q86WN1	690 aa		32.16	■■■□□ 2.74
PPP1R35-204	ENST00000487452	RIC8A	Q9NPQ8	531 aa		32.16	■■■□□ 2.74
PPP1R35-204	ENST00000487452	RARB	P10826	455 aa		32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	USP17L6P	Q6QN14	398 aa		32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	FAM177A1	Q8N128	213 aa	Predicted RBP	32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ANKLE1	Q8NAG6	615 aa		32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	SH3GLB2	Q9NR46	395 aa		32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	SH2B1	Q9NRF2	756 aa	Predicted RBP	32.15	■■■□□ 2.74
PPP1R35-204	ENST00000487452	LCT	P09848	1927 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ESYT2	A0FGR8	921 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	SMCO2	A6NFE2	343 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	EIF2AK2	P19525	551 aa	Known RBP	32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	ADCY7	P51828	1080 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	STXBP2	Q15833	593 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	CCDC144B	Q3MJ40	725 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	TYW1B	Q6NUM6	668 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	CCDC148	Q8NFR7	591 aa		32.14	■■■□□ 2.74
PPP1R35-204	ENST00000487452	NR3C2	P08235	984 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	IQSEC1	Q6DN90	963 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	NECAB1	Q8N987	351 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	SHISA4	Q96DD7	197 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	PDCD2L	Q9BRP1	358 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	STK36	Q9NRP7	1315 aa		32.13	■■■□□ 2.73
PPP1R35-204	ENST00000487452	PPFIA3	O75145	1194 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	EIF3J	O75822	258 aa	Known RBP	32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	LARGE1	O95461	756 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	GNA11	P29992	359 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	EEPD1	Q7L9B9	569 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	FBXO16	Q8IX29	292 aa	Predicted RBP	32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	C6orf50	Q9HD87	102 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	BRCA2	P51587	3418 aa		32.12	■■■□□ 2.73
PPP1R35-204	ENST00000487452	FRMPD4	Q14CM0	1322 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	SPDYE3	A6NKU9	549 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	FOS	P01100	380 aa	Predicted RBP	32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	MCM2	P49736	904 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	TAPT1	Q6NXT6	567 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	ARRDC4	Q8NCT1	418 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	WASF1	Q92558	559 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	ZMYND12	Q9H0C1	365 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	EHMT1	Q9H9B1	1298 aa		32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	DDX49	Q9Y6V7	483 aa	Known RBP	32.11	■■■□□ 2.73
PPP1R35-204	ENST00000487452	DUSP11	O75319	330 aa	Known RBP	32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	CCND2	P30279	289 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	PGM5	Q15124	567 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	MCTP2	Q6DN12	878 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	XRRA1	Q6P2D8	792 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	VSIG10L	Q86VR7	867 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	MCM3AP	O60318	1980 aa		32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	TNRC18	O15417	2968 aa	Predicted RBP	32.1	■■■□□ 2.73
PPP1R35-204	ENST00000487452	RBM47	A0AV96	593 aa	Known RBP	32.09	■■■□□ 2.73
PPP1R35-204	ENST00000487452	TNFAIP2	Q03169	654 aa		32.09	■■■□□ 2.73
PPP1R35-204	ENST00000487452	BICD2	Q8TD16	824 aa		32.09	■■■□□ 2.73
PPP1R35-204	ENST00000487452	SCFD2	Q8WU76	684 aa		32.09	■■■□□ 2.73
PPP1R35-204	ENST00000487452	XPNPEP3	Q9NQH7	507 aa		32.09	■■■□□ 2.73
PPP1R35-204	ENST00000487452	STAM2	O75886	525 aa		32.08	■■■□□ 2.73
PPP1R35-204	ENST00000487452	CTDNEP1	O95476	244 aa		32.08	■■■□□ 2.73
PPP1R35-204	ENST00000487452	ORC3	Q9UBD5	711 aa	Predicted RBP	32.08	■■■□□ 2.73
PPP1R35-204	ENST00000487452	MYCL	P12524	364 aa	Predicted RBP	32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	XBP1	P17861	261 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	ADCYAP1R1	P41586	468 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	AP3B2	Q13367	1082 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	UBE2S	Q16763	222 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	ANO1	Q5XXA6	986 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	LLPH	Q9BRT6	129 aa	Known RBP	32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	WDR11	Q9BZH6	1224 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	SPC25	Q9HBM1	224 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	PDGFC	Q9NRA1	345 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	VPS54	Q9P1Q0	977 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452		Q9Y3F1	56 aa		32.07	■■■□□ 2.72
PPP1R35-204	ENST00000487452	FARP2	O94887	1054 aa	Predicted RBP	32.06	■■■□□ 2.72
PPP1R35-204	ENST00000487452	NSUN7	Q8NE18	718 aa	Known RBP	32.06	■■■□□ 2.72
PPP1R35-204	ENST00000487452	PCDHA6	Q9UN73	950 aa		32.06	■■■□□ 2.72
PPP1R35-204	ENST00000487452	PCDHA8	Q9Y5H6	950 aa		32.06	■■■□□ 2.72
PPP1R35-204	ENST00000487452	NKRF	O15226	690 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	TTLL4	Q14679	1199 aa		32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	DUSP28	Q4G0W2	176 aa		32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	PCNX4	Q63HM2	1172 aa		32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	GALNT17	Q6IS24	598 aa		32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	RNF180	Q86T96	592 aa		32.05	■■■□□ 2.72
PPP1R35-204	ENST00000487452	DNM1L	O00429	736 aa		32.04	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms