RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
PFDN4-204ENST00000487129 SUGCTQ9HAC7 445 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
PFDN4-204ENST00000487129 APPP05067 770 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 ZFYP08048 801 aaPredicted RBP17.67■□□□□ 0.42
PFDN4-204ENST00000487129 PDE4BQ07343 736 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 BFSP2Q13515 415 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 BTNL9Q6UXG8 535 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 ALYREFQ86V81 257 aaKnown RBP17.67■□□□□ 0.42
PFDN4-204ENST00000487129 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 UBE2ZQ9H832 354 aaPredicted RBP17.67■□□□□ 0.42
PFDN4-204ENST00000487129 ADD3Q9UEY8 706 aaKnown RBP17.67■□□□□ 0.42
PFDN4-204ENST00000487129 STX8Q9UNK0 236 aa17.67■□□□□ 0.42
PFDN4-204ENST00000487129 PRR33A8MZF0 331 aa17.66■□□□□ 0.42
PFDN4-204ENST00000487129 ARIH2O95376 493 aa17.66■□□□□ 0.42
PFDN4-204ENST00000487129 SLC16A2P36021 539 aa17.66■□□□□ 0.42
PFDN4-204ENST00000487129 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
PFDN4-204ENST00000487129 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.66■□□□□ 0.42
PFDN4-204ENST00000487129 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
PFDN4-204ENST00000487129 NKRFO15226 690 aaKnown RBP eCLIP17.65■□□□□ 0.42
PFDN4-204ENST00000487129 CXCL10P02778 98 aa17.65■□□□□ 0.42
PFDN4-204ENST00000487129 ERVK-21P61565 698 aa17.65■□□□□ 0.42
PFDN4-204ENST00000487129 RBL2Q08999 1139 aa17.65■□□□□ 0.42
PFDN4-204ENST00000487129 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
PFDN4-204ENST00000487129 LEXMQ3ZCV2 418 aa17.65■□□□□ 0.42
PFDN4-204ENST00000487129 LINC01553A4QN01 128 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 KPNA6O60684 536 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 NBNO60934 754 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 GJB5O95377 273 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 KCNJ6P48051 423 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
PFDN4-204ENST00000487129 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
PFDN4-204ENST00000487129 TRAF7Q6Q0C0 670 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 SESTD1Q86VW0 696 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 GJD3Q8N144 294 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 CAGE1Q8TC20 777 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 AFAP1L1Q8TED9 768 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 SCFD2Q8WU76 684 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 KAT2BQ92831 832 aa17.64■□□□□ 0.41
PFDN4-204ENST00000487129 TRIP12Q14669 1992 aaPredicted RBP17.64■□□□□ 0.41
PFDN4-204ENST00000487129 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 MS4A1P11836 297 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 IL9P15248 144 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
PFDN4-204ENST00000487129 PTGISQ16647 500 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 DCAF4Q8WV16 495 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 NAPBQ9H115 298 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 RAD50Q92878 1312 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 SIP14410 1827 aa17.63■□□□□ 0.41
PFDN4-204ENST00000487129 WDFY4Q6ZS81 3184 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 TSPY2A6NKD2 308 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 TXNP10599 105 aaKnown RBP17.62■□□□□ 0.41
PFDN4-204ENST00000487129 SELPP16109 830 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 CALML3P27482 149 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 RPS6P62753 249 aaKnown RBP17.62■□□□□ 0.41
PFDN4-204ENST00000487129 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
PFDN4-204ENST00000487129 PPP4R3BQ5MIZ7 849 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 ZMYM1Q5SVZ6 1142 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 SYDE2Q5VT97 1194 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 CNKSR3Q6P9H4 555 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 LRRC8DQ7L1W4 858 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 TGS1Q96RS0 853 aaKnown RBP17.62■□□□□ 0.41
PFDN4-204ENST00000487129 RAD9AQ99638 391 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 MTMR7Q9Y216 660 aa17.62■□□□□ 0.41
PFDN4-204ENST00000487129 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
PFDN4-204ENST00000487129 KCNA5P22460 613 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 PDE4DQ08499 809 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 MBTPS1Q14703 1052 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 RNF207Q6ZRF8 634 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 AFG1LQ8WV93 481 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
PFDN4-204ENST00000487129 GRXCR2A6NFK2 248 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 MMP3P08254 477 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 FGRP09769 529 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 CKBP12277 381 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 ARHGAP1Q07960 439 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 TRIM71Q2Q1W2 868 aaKnown RBP17.6■□□□□ 0.41
PFDN4-204ENST00000487129 DNERQ8NFT8 737 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 NEK9Q8TD19 979 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 WNT8BQ93098 351 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 ZBED2Q9BTP6 218 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 ANAPC4Q9UJX5 808 aa17.6■□□□□ 0.41
PFDN4-204ENST00000487129 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
PFDN4-204ENST00000487129 ABHD14A-ACY1A0A1B0GW23 586 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 ORC4O43929 436 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 MRE11P49959 708 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 PTCRAQ6ISU1 281 aaPredicted RBP17.59■□□□□ 0.41
PFDN4-204ENST00000487129 CCDC155Q8N6L0 562 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 C17orf80Q9BSJ5 609 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
PFDN4-204ENST00000487129 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms