RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 RNF146Q9NTX7 359 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
PTPN7-213ENST00000486116 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 ACACBO00763 2458 aa11.63□□□□□ -0.55
PTPN7-213ENST00000486116 LINC01565O15544 149 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 NCK2O43639 380 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 PRKAB2O43741 272 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 EFCAB14O75071 495 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 KDM4AO75164 1064 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 PDGFBP01127 241 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 PDE6AP16499 860 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 GTF2F1P35269 517 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■□□□□ 10.7
PTPN7-213ENST00000486116 RBL2Q08999 1139 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 IKBKEQ14164 716 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 CBX2Q14781 532 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 C12orf60Q5U649 245 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 GDF6Q6KF10 455 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 FBXO11Q86XK2 927 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 ADSSL1Q8N142 457 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 OR6J1Q8NGC5 347 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 WDR11Q9BZH6 1224 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 CCDC8Q9H0W5 538 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-213ENST00000486116 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
PTPN7-213ENST00000486116 TCRBV5S4A2TA0A5A2 114 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
PTPN7-213ENST00000486116 CKBP12277 381 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 NUBP1P53384 320 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 MBTPS1Q14703 1052 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 TRAF7Q6Q0C0 670 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 FRMD5Q7Z6J6 570 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 TMEM192Q8IY95 271 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 API5Q9BZZ5 524 aaKnown RBP11.61□□□□□ -0.55
PTPN7-213ENST00000486116 ARMT1Q9H993 441 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 CYP39A1Q9NYL5 469 aa11.61□□□□□ -0.55
PTPN7-213ENST00000486116 MAP1BP46821 2468 aaKnown RBP11.61□□□□□ -0.55
PTPN7-213ENST00000486116 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-213ENST00000486116 A6NJR5 290 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 PARNO95453 639 aaKnown RBP11.6□□□□□ -0.55
PTPN7-213ENST00000486116 SLC9C2Q5TAH2 1124 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 MYOCDQ8IZQ8 938 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-213ENST00000486116 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-213ENST00000486116 RMDN1Q96DB5 314 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 MSLNLQ96KJ4 702 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 NYAP2Q9P242 653 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
PTPN7-213ENST00000486116 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 LGR5O75473 907 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 EYA4O95677 639 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 AMHP03971 560 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 GNAI2P04899 355 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 OS9Q13438 667 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-213ENST00000486116 MUM1L1Q5H9M0 696 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 DGLUCYQ7Z3D6 616 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 COPS5Q92905 334 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 TRERF1Q96PN7 1200 aa11.59□□□□□ -0.55
PTPN7-213ENST00000486116 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.55
PTPN7-213ENST00000486116 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 E9PSI1 815 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 GRM6O15303 877 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 KPNA6O60684 536 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 ALAS1P13196 640 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 ADAM15Q13444 863 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 POLA2Q14181 598 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 TRIM71Q2Q1W2 868 aaKnown RBP11.58□□□□□ -0.56
PTPN7-213ENST00000486116 TMEM105Q8N8V8 129 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 WNT8BQ93098 351 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 IGFLR1Q9H665 355 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 CLEC1BQ9P126 229 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 MYO10Q9HD67 2058 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 RAD50Q92878 1312 aa11.58□□□□□ -0.56
PTPN7-213ENST00000486116 USP24Q9UPU5 2620 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 PLXNA4Q9HCM2 1894 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 MBD4O95243 580 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 LINC00271P0C7V0 271 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 RASA1P20936 1047 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 ICAM3P32942 547 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 ALDH5A1P51649 535 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-213ENST00000486116 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
PTPN7-213ENST00000486116 PTPN21Q16825 1174 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 TKFCQ3LXA3 575 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-213ENST00000486116 ZNF618Q5T7W0 954 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 SMRP1Q8NCR6 262 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 DBF4BQ8NFT6 615 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 KAT2BQ92831 832 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 RIPOR3Q96MK2 946 aa11.57□□□□□ -0.56
PTPN7-213ENST00000486116 YME1L1Q96TA2 773 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms