RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
HPS4-214ENST00000485842 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
HPS4-214ENST00000485842 MAP3K20Q9NYL2 800 aaKnown RBP13.63□□□□□ -0.23
HPS4-214ENST00000485842 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
HPS4-214ENST00000485842 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
HPS4-214ENST00000485842 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
HPS4-214ENST00000485842 SEPT4O43236 478 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 SGPL1O95470 568 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 TFRCP02786 760 aaKnown RBP13.62□□□□□ -0.23
HPS4-214ENST00000485842 ZNF865P0CJ78 1059 aaPredicted RBP13.62□□□□□ -0.23
HPS4-214ENST00000485842 EN2P19622 333 aaPredicted RBP13.62□□□□□ -0.23
HPS4-214ENST00000485842 GJA8P48165 433 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 ADCY7P51828 1080 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 SAMD3Q8N6K7 520 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
HPS4-214ENST00000485842 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
HPS4-214ENST00000485842 LOC102724159A0A0B4J2E5 919 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 MEIS2O14770 477 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 MSCO60682 206 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 DEXIO95424 95 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
HPS4-214ENST00000485842 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
HPS4-214ENST00000485842 AKR1A1P14550 325 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 EDNRBP24530 442 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 PWP2Q15269 919 aaKnown RBP13.61□□□□□ -0.23
HPS4-214ENST00000485842 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 MORC4Q8TE76 937 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
HPS4-214ENST00000485842 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
HPS4-214ENST00000485842 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 PIK3CDO00329 1044 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
HPS4-214ENST00000485842 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 RARBP10826 455 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 PGM5Q15124 567 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 LHX8Q68G74 356 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 IL31RAQ8NI17 732 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
HPS4-214ENST00000485842 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
HPS4-214ENST00000485842 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 PDCD2LQ9BRP1 358 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 CENPFP49454 3210 aa13.6□□□□□ -0.23
HPS4-214ENST00000485842 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
HPS4-214ENST00000485842 ADCY6O43306 1168 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 JAK2O60674 1132 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 NR3C2P08235 984 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 STXBP2Q15833 593 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
HPS4-214ENST00000485842 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
HPS4-214ENST00000485842 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
HPS4-214ENST00000485842 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
HPS4-214ENST00000485842 KIAA1217Q5T5P2 1943 aa13.58□□□□□ -0.23
HPS4-214ENST00000485842 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
HPS4-214ENST00000485842 CCND2P30279 289 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 FOSBP53539 338 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 NLRP5P59047 1200 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
HPS4-214ENST00000485842 ADAMTS3O15072 1205 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 PGK1P00558 417 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 SMPD1P17405 629 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 PTGS1P23219 599 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 GNA11P29992 359 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 GJC2Q5T442 439 aaPredicted RBP13.57□□□□□ -0.24
HPS4-214ENST00000485842 REXO1Q8N1G1 1221 aaKnown RBP13.57□□□□□ -0.24
HPS4-214ENST00000485842 RASGRP4Q8TDF6 673 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
HPS4-214ENST00000485842 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 WASF1Q92558 559 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 ALG1Q9BT22 464 aa13.57□□□□□ -0.24
HPS4-214ENST00000485842 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms