RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 MYOM1P52179 1685 aa4.85□□□□□ -1.63
PRPF38B-205ENST00000485810 ERVK-7P63135 1459 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 FAM155AB1AL88 458 aaPredicted RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 NPHP1O15259 732 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 CBFA2T2O43439 604 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TIMM44O43615 452 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TMEM253P0C7T8 217 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 HOXA5P20719 270 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 SLFN5Q08AF3 891 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 SCARA3Q6AZY7 606 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 BNC2Q6ZN30 1099 aaPredicted RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TMC4Q7Z404 712 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TTC6Q86TZ1 520 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 JAZF1Q86VZ6 243 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 MRFAP1L1Q96HT8 127 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 CEP89Q96ST8 783 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TINF2Q9BSI4 451 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 DCP1AQ9NPI6 582 aaPredicted RBP4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 TJP2Q9UDY2 1190 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 ABCF2Q9UG63 623 aa4.84□□□□□ -1.63
PRPF38B-205ENST00000485810 EFCAB6Q5THR3 1501 aa4.84□□□□□ -1.64
PRPF38B-205ENST00000485810 KDM5AP29375 1690 aaKnown RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 IFT172Q9UG01 1749 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 UPK3BL1B0FP48 263 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 UPK3BL2E5RIL1 263 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 PGRP06401 933 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 PDGFRBP09619 1106 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 GLDCP23378 1020 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 TNK2Q07912 1038 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 RBL2Q08999 1139 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 RAD51AP2Q09MP3 1159 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 BRD3Q15059 726 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 MAPRE1Q15691 268 aaKnown RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 ODR4Q5SWX8 454 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 GJC2Q5T442 439 aaPredicted RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 LETMD1Q6P1Q0 360 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 PHC3Q8NDX5 983 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 ABHD4Q8TB40 342 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 RELTQ969Z4 430 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 CRBNQ96SW2 442 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 TMX1Q9H3N1 280 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 IFT122Q9HBG6 1241 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 ZSWIM5Q9P217 1185 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 VTI1BQ9UEU0 232 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 NOL7Q9UMY1 257 aaKnown RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 ADGRB3O60242 1522 aa4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 NKTRP30414 1462 aaKnown RBP4.83□□□□□ -1.64
PRPF38B-205ENST00000485810 USP31Q70CQ4 1352 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 USP32Q8NFA0 1604 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MINDY4BA8MYZ0 360 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 SORBS3O60504 671 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 CST3P01034 146 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 FOSP01100 380 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 PF4P02776 101 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 HPXP02790 462 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 DNAJA1P31689 397 aaKnown RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 TRHRP34981 398 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 SSR1P43307 286 aaKnown RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 IRX3P78415 501 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 FAM160A1Q05DH4 1040 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 HSP90AA2PQ14568 343 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 WDR43Q15061 677 aaKnown RBP eCLIP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MAP9Q49MG5 647 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 RPAINQ86UA6 219 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MFSD2AQ8NA29 543 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 ZNF512BQ96KM6 892 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MPHOSPH6Q99547 160 aaKnown RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 TGIF2Q9GZN2 237 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 SLKQ9H2G2 1235 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 ADAMTS10Q9H324 1103 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 EPB41L4BQ9H329 900 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 CASS4Q9NQ75 786 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 TYW1Q9NV66 732 aaKnown RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 PRKAB1Q9Y478 270 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 CTDP1Q9Y5B0 961 aaPredicted RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MRPL42Q9Y6G3 142 aaKnown RBP4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 ZNF518AQ6AHZ1 1483 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 MLH3Q9UHC1 1453 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 ABCA6Q8N139 1617 aa4.82□□□□□ -1.64
PRPF38B-205ENST00000485810 KIF3BO15066 747 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 F13A1P00488 732 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 FGAP02671 866 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 COL6A1P12109 1028 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 CTSWP56202 376 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 LINC00310P59036 64 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 RPL6Q02878 288 aaKnown RBP4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 CAMK2GQ13555 558 aaPredicted RBP4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 KCTD2Q14681 263 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 VPS72Q15906 364 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 HSP90AB3PQ58FF7 597 aa4.81□□□□□ -1.64
PRPF38B-205ENST00000485810 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms