RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 BACH2Q9BYV9 841 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 MKRN2Q9H000 416 aaKnown RBP6.05□□□□□ -1.44
VPS8-223ENST00000485024 VTI1BQ9UEU0 232 aa6.05□□□□□ -1.44
VPS8-223ENST00000485024 A0A087X1B8 175 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
VPS8-223ENST00000485024 OVOS1Q6IE37 1185 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 REC114Q7Z4M0 266 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 TMEM192Q8IY95 271 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 TMEM87AQ8NBN3 555 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 PEX11GQ96HA9 241 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 CRAMP1Q96RY5 1269 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 PRR13Q9NZ81 148 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 GMIPQ9P107 970 aa6.04□□□□□ -1.44
VPS8-223ENST00000485024 H0Y8X5 98 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 ERCC5P28715 1186 aaPredicted RBP6.03□□□□□ -1.44
VPS8-223ENST00000485024 L1CAMP32004 1257 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 PPP2CBP62714 309 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 PPP2CAP67775 309 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 CSRP2Q16527 193 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 FAM26EQ8N5C1 309 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 DRC1Q96MC2 740 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
VPS8-223ENST00000485024 IGSF3O75054 1194 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 PPFIA2O75334 1257 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 AUHQ13825 339 aaKnown RBP6.02□□□□□ -1.45
VPS8-223ENST00000485024 PKN3Q6P5Z2 889 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 NETO2Q8NC67 525 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 SREK1Q8WXA9 508 aaKnown RBP6.02□□□□□ -1.45
VPS8-223ENST00000485024 RNF34Q969K3 372 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 RHOVQ96L33 236 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 PTCHD1Q96NR3 888 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 NOC4LQ9BVI4 516 aaKnown RBP6.02□□□□□ -1.45
VPS8-223ENST00000485024 RNF19AQ9NV58 838 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 AK5Q9Y6K8 562 aa6.02□□□□□ -1.45
VPS8-223ENST00000485024 SHOXO15266 292 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 INHBCP55103 352 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 ITGA1P56199 1179 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 DPY19L2P1Q6NXN4 242 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 CABP7Q86V35 215 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 TTLL6Q8N841 843 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 ZG16BQ96DA0 208 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 CNNM2Q9H8M5 875 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 NUDT5Q9UKK9 219 aa6.01□□□□□ -1.45
VPS8-223ENST00000485024 ZNF28P17035 718 aa6□□□□□ -1.45
VPS8-223ENST00000485024 ZNF76P36508 570 aa6□□□□□ -1.45
VPS8-223ENST00000485024 GNL2Q13823 731 aaKnown RBP6□□□□□ -1.45
VPS8-223ENST00000485024 MLECQ14165 292 aa6□□□□□ -1.45
VPS8-223ENST00000485024 MPP2Q14168 576 aa6□□□□□ -1.45
VPS8-223ENST00000485024 SLFN13Q68D06 897 aa6□□□□□ -1.45
VPS8-223ENST00000485024 ARHGEF18Q6ZSZ5 1173 aa6□□□□□ -1.45
VPS8-223ENST00000485024 JADE2Q9NQC1 790 aa6□□□□□ -1.45
VPS8-223ENST00000485024 RWDD3Q9Y3V2 267 aa6□□□□□ -1.45
VPS8-223ENST00000485024 KRTAP29-1A8MX34 341 aaPredicted RBP5.99□□□□□ -1.45
VPS8-223ENST00000485024 ZBTB7AO95365 584 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 MCM7P33993 719 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 DGCR2P98153 550 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 POU4F1Q01851 419 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 NRN1LQ496H8 165 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
VPS8-223ENST00000485024 LDLRAD3Q86YD5 345 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 SLC6A18Q96N87 628 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 TGIF2Q9GZN2 237 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 SIT1Q9Y3P8 196 aa5.99□□□□□ -1.45
VPS8-223ENST00000485024 PPP1R11O60927 126 aaPredicted RBP5.98□□□□□ -1.45
VPS8-223ENST00000485024 HDLBPQ00341 1268 aaKnown RBP5.98□□□□□ -1.45
VPS8-223ENST00000485024 FAM160A1Q05DH4 1040 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 NAALADL2Q58DX5 795 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 LZTR1Q8N653 840 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 ATG4CQ96DT6 458 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 FAM161BQ96MY7 647 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 FCRL3Q96P31 734 aaPredicted RBP5.98□□□□□ -1.45
VPS8-223ENST00000485024 CCSER2Q9H7U1 834 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 PCDH18Q9HCL0 1135 aa5.98□□□□□ -1.45
VPS8-223ENST00000485024 TBC1D8O95759 1140 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
VPS8-223ENST00000485024 IFNGR1P15260 489 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 CCNFP41002 786 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 PTH1RQ03431 593 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 PRKD1Q15139 912 aaPredicted RBP5.97□□□□□ -1.45
VPS8-223ENST00000485024 ETV3LQ6ZN32 361 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 NT5DC4Q86YG4 428 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 KBTBD2Q8IY47 623 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 NEU4Q8WWR8 484 aaPredicted RBP5.97□□□□□ -1.45
VPS8-223ENST00000485024 UBXN4Q92575 508 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 YTHDC1Q96MU7 727 aaKnown RBP5.97□□□□□ -1.45
VPS8-223ENST00000485024 AGAP2Q99490 1192 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 MTA3Q9BTC8 594 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 CSRNP2Q9H175 543 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 PCDHB14Q9Y5E9 798 aa5.97□□□□□ -1.45
VPS8-223ENST00000485024 FANCCQ00597 558 aa5.96□□□□□ -1.46
VPS8-223ENST00000485024 LSM12Q3MHD2 195 aaKnown RBP5.96□□□□□ -1.46
VPS8-223ENST00000485024 USP39Q53GS9 565 aaKnown RBP5.96□□□□□ -1.46
VPS8-223ENST00000485024 PCSK4Q6UW60 755 aa5.96□□□□□ -1.46
VPS8-223ENST00000485024 CD300LDQ6UXZ3 194 aa5.96□□□□□ -1.46
VPS8-223ENST00000485024 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
VPS8-223ENST00000485024 TLR3O15455 904 aaKnown RBP5.95□□□□□ -1.46
VPS8-223ENST00000485024 ATE1O95260 518 aa5.95□□□□□ -1.46
VPS8-223ENST00000485024 ST13P50502 369 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms