RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 TMEM47Q9BQJ4 181 aa13.57□□□□□ -0.24
COL13A1-209ENST00000484990 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
COL13A1-209ENST00000484990 TRIP12Q14669 1992 aaPredicted RBP13.57□□□□□ -0.24
COL13A1-209ENST00000484990 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
COL13A1-209ENST00000484990 KCNQ1P51787 676 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
COL13A1-209ENST00000484990 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
COL13A1-209ENST00000484990 HERC6Q8IVU3 1022 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
COL13A1-209ENST00000484990 MAF1Q9H063 256 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 SCN10AQ9Y5Y9 1956 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 LRRC37A2A6NM11 1700 aa13.56□□□□□ -0.24
COL13A1-209ENST00000484990 TLL1O43897 1013 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 MX1P20591 662 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 TAP1Q03518 808 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 PTGISQ16647 500 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 RASGRP2Q7LDG7 609 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 RGS22Q8NE09 1264 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 CLEC4DQ8WXI8 215 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 LMCD1Q9NZU5 365 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
COL13A1-209ENST00000484990 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
COL13A1-209ENST00000484990 TRANK1O15050 2925 aa13.55□□□□□ -0.24
COL13A1-209ENST00000484990 LCTP09848 1927 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 CASTP20810 708 aaKnown RBP13.54□□□□□ -0.24
COL13A1-209ENST00000484990 EDNRBP24530 442 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 COPS5Q92905 334 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
COL13A1-209ENST00000484990 FOXP2O15409 715 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 FGAP02671 866 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 PDHBP11177 359 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
COL13A1-209ENST00000484990 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 MCMDC2Q4G0Z9 681 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
COL13A1-209ENST00000484990 VPS53Q5VIR6 699 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 HCN4Q9Y3Q4 1203 aa13.53□□□□□ -0.24
COL13A1-209ENST00000484990 EPOPA6NHQ4 379 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 GH1P01241 217 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 SELPP16109 830 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 GRB10Q13322 594 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 TMEM31Q5JXX7 168 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 KRT40Q6A162 431 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 SESTD1Q86VW0 696 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
COL13A1-209ENST00000484990 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.25
COL13A1-209ENST00000484990 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
COL13A1-209ENST00000484990 ABHD14A-ACY1A0A1B0GW23 586 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 EFCAB14O75071 495 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
COL13A1-209ENST00000484990 STXBP2Q15833 593 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 DGKDQ16760 1214 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 USH1GQ495M9 461 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 CCDC178Q5BJE1 867 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 CNKSR3Q6P9H4 555 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 MCF2L2Q86YR7 1114 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 PPP1R13LQ8WUF5 828 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 AFG1LQ8WV93 481 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 RAD9AQ99638 391 aa13.51□□□□□ -0.25
COL13A1-209ENST00000484990 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
COL13A1-209ENST00000484990 REV3LO60673 3130 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 LPXNO60711 386 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 GPR37L1O60883 481 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 ARIH2O95376 493 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 MMP3P08254 477 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
COL13A1-209ENST00000484990 IKBKEQ14164 716 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 GDF6Q6KF10 455 aaPredicted RBP13.5□□□□□ -0.25
COL13A1-209ENST00000484990 LRRC8DQ7L1W4 858 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 C7orf31Q8N865 590 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 ESR2Q92731 530 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
COL13A1-209ENST00000484990 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
COL13A1-209ENST00000484990 ABCB11O95342 1321 aa13.49□□□□□ -0.25
COL13A1-209ENST00000484990 ZMYM6O95789 1325 aa13.49□□□□□ -0.25
COL13A1-209ENST00000484990 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
COL13A1-209ENST00000484990 CXCL10P02778 98 aa13.49□□□□□ -0.25
COL13A1-209ENST00000484990 NT5C2P49902 561 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms