RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 AKAP8O43823 692 aaKnown RBP5.35□□□□□ -1.55
VPS50-216ENST00000484954 ITGAVP06756 1048 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 THBDP07204 575 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 GLI4P10075 376 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 PAMP19021 973 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 LIMS1P48059 325 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 CORO7P57737 925 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 PRR5P85299 388 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 ARID5AQ03989 594 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 EFEMP1Q12805 493 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 SF1Q15637 639 aaKnown RBP5.35□□□□□ -1.55
VPS50-216ENST00000484954 INF2Q27J81 1249 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 ZC3H14Q6PJT7 736 aaKnown RBP5.35□□□□□ -1.55
VPS50-216ENST00000484954 PAQR3Q6TCH7 311 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 ZNF227Q86WZ6 799 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 HNRNPLLQ8WVV9 542 aaKnown RBP5.35□□□□□ -1.55
VPS50-216ENST00000484954 DPF3Q92784 378 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 GPR20Q99678 358 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 PODXL2Q9NZ53 605 aa5.35□□□□□ -1.55
VPS50-216ENST00000484954 IRS2Q9Y4H2 1338 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 F8W031 263 aaPredicted RBP5.34□□□□□ -1.55
VPS50-216ENST00000484954 SUSD5O60279 629 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 DDAH1O94760 285 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 GJB6O95452 261 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 IGFBP6P24592 240 aaPredicted RBP5.34□□□□□ -1.55
VPS50-216ENST00000484954 ZNF143P52747 638 aaPredicted RBP5.34□□□□□ -1.55
VPS50-216ENST00000484954 GNL2Q13823 731 aaKnown RBP5.34□□□□□ -1.55
VPS50-216ENST00000484954 NR1I3Q14994 352 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 TNNI3KQ59H18 835 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 OLFML2BQ68BL8 750 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 FAM129CQ86XR2 697 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 SP8Q8IXZ3 490 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 CELF2-AS1Q8N7Q2 184 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 NKX2-4Q9H2Z4 354 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 TMEFF2Q9UIK5 374 aaPredicted RBP5.34□□□□□ -1.55
VPS50-216ENST00000484954 SIT1Q9Y3P8 196 aa5.34□□□□□ -1.55
VPS50-216ENST00000484954 NOP56O00567 594 aaKnown RBP5.33□□□□□ -1.56
VPS50-216ENST00000484954 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
VPS50-216ENST00000484954 ATF2P15336 505 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 MC3RP41968 323 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 TMEM62Q0P6H9 643 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 SV2CQ496J9 727 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 CCDC103Q8IW40 242 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 LZTR1Q8N653 840 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 NPLOC4Q8TAT6 608 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 ST7Q9NRC1 585 aa5.33□□□□□ -1.56
VPS50-216ENST00000484954 FUCA1P04066 466 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 GRIA2P42262 883 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 RTP5Q14D33 572 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 DENND5AQ6IQ26 1287 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 CNKSR3Q6P9H4 555 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 POMZP3Q6PJE2 187 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 KREMEN2Q8NCW0 462 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 PLEKHO2Q8TD55 490 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 GMLQ99445 158 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 CYP26B1Q9NR63 512 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 FBXL7Q9UJT9 491 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
VPS50-216ENST00000484954 PRICKLE3O43900 615 aaPredicted RBP5.31□□□□□ -1.56
VPS50-216ENST00000484954 NPHS1O60500 1241 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
VPS50-216ENST00000484954 NTRK1P04629 796 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 CAPNS1P04632 268 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 ASGR2P07307 311 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 NAT2P11245 290 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 ECI1P42126 302 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 FXNQ16595 210 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 SLC10A6Q3KNW5 377 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 HHIPL2Q6UWX4 724 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 ANKS3Q6ZW76 656 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 TEX2Q8IWB9 1127 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 CRACR2BQ8N4Y2 399 aaPredicted RBP5.31□□□□□ -1.56
VPS50-216ENST00000484954 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 MMP19Q99542 508 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 BTG4Q9NY30 223 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 MARCH2Q9P0N8 246 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 LRP2BPQ9P2M1 347 aa5.31□□□□□ -1.56
VPS50-216ENST00000484954 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
VPS50-216ENST00000484954 KLF4O43474 513 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
VPS50-216ENST00000484954 FPR2P25090 351 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 PMLP29590 882 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 WWC2Q6AWC2 1192 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 NLRP10Q86W26 655 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 ADGRG2Q8IZP9 1017 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 SLC43A3Q8NBI5 491 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 TP53I13Q8NBR0 393 aaPredicted RBP5.3□□□□□ -1.56
VPS50-216ENST00000484954 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
VPS50-216ENST00000484954 TRBV23OR9-2A0A075B6M9 112 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 OVOL3O00110 214 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 LCP1P13796 627 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 GFRA1P56159 465 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 ZXDAP98168 799 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 DDR2Q16832 855 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 FRMD5Q7Z6J6 570 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 TMEM145Q8NBT3 493 aa5.29□□□□□ -1.56
VPS50-216ENST00000484954 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms