RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 HEATR3Q7Z4Q2 680 aa30.72■■■□□ 2.51
SMDT1-203ENST00000484235 DIS3LQ8TF46 1054 aaKnown RBP30.72■■■□□ 2.51
SMDT1-203ENST00000484235 DNM1LO00429 736 aa30.71■■■□□ 2.51
SMDT1-203ENST00000484235 TNFAIP2Q03169 654 aa30.71■■■□□ 2.51
SMDT1-203ENST00000484235 FBXO16Q8IX29 292 aaPredicted RBP30.71■■■□□ 2.51
SMDT1-203ENST00000484235 PSTPIP2Q9H939 334 aa30.71■■■□□ 2.51
SMDT1-203ENST00000484235 PXMP2Q9NR77 195 aa30.71■■■□□ 2.51
SMDT1-203ENST00000484235 LCTP09848 1927 aa30.71■■■□□ 2.51
SMDT1-203ENST00000484235 PIK3CDO00329 1044 aa30.7■■■□□ 2.51
SMDT1-203ENST00000484235 NEK4P51957 841 aa30.7■■■□□ 2.51
SMDT1-203ENST00000484235 NTRK3Q16288 839 aa30.7■■■□□ 2.51
SMDT1-203ENST00000484235 CUL5Q93034 780 aa30.7■■■□□ 2.51
SMDT1-203ENST00000484235 NCOA5Q9HCD5 579 aaKnown RBP30.7■■■□□ 2.51
SMDT1-203ENST00000484235 PDGFCQ9NRA1 345 aa30.7■■■□□ 2.51
SMDT1-203ENST00000484235 hCG_1984214I3L0E3 225 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 PRPF3O43395 683 aaKnown RBP30.69■■■□□ 2.5
SMDT1-203ENST00000484235 IFNAR1P17181 557 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 ADCYAP1R1P41586 468 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 STXBP2Q15833 593 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 GJC2Q5T442 439 aaPredicted RBP30.69■■■□□ 2.5
SMDT1-203ENST00000484235 WWC2Q6AWC2 1192 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 RNF180Q86T96 592 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 FCHSD1Q86WN1 690 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 ZNF713Q8N859 430 aaPredicted RBP30.69■■■□□ 2.5
SMDT1-203ENST00000484235 GPKOWQ92917 476 aaPredicted RBP eCLIP30.69■■■□□ 2.5
SMDT1-203ENST00000484235 LENG1Q96BZ8 264 aaPredicted RBP30.69■■■□□ 2.5
SMDT1-203ENST00000484235 C22orf23Q9BZE7 217 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 C11orf49Q9H6J7 331 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 NR2E3Q9Y5X4 410 aa30.69■■■□□ 2.5
SMDT1-203ENST00000484235 RBM47A0AV96 593 aaKnown RBP30.68■■■□□ 2.5
SMDT1-203ENST00000484235 ADCY6O43306 1168 aa30.68■■■□□ 2.5
SMDT1-203ENST00000484235 PGK1P00558 417 aa30.68■■■□□ 2.5
SMDT1-203ENST00000484235 COL6A1P12109 1028 aa30.68■■■□□ 2.5
SMDT1-203ENST00000484235 EIF2AK2P19525 551 aaKnown RBP30.68■■■□□ 2.5
SMDT1-203ENST00000484235 AK2P54819 239 aa30.68■■■□□ 2.5
SMDT1-203ENST00000484235 LRRC41Q15345 812 aa30.68■■■□□ 2.5
SMDT1-203ENST00000484235 MCM3APO60318 1980 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-203ENST00000484235 KBTBD13C9JR72 458 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 MEIS2O14770 477 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 MYCNP04198 464 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-203ENST00000484235 NR3C2P08235 984 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 AKAP17AQ02040 695 aaKnown RBP30.67■■■□□ 2.5
SMDT1-203ENST00000484235 PFKFB3Q16875 520 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-203ENST00000484235 USP17L6PQ6QN14 398 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 NOL8Q76FK4 1167 aaKnown RBP30.67■■■□□ 2.5
SMDT1-203ENST00000484235 TEX2Q8IWB9 1127 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 SMARCC2Q8TAQ2 1214 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 SPC25Q9HBM1 224 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 BARHL2Q9NY43 387 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 TPCN1Q9ULQ1 816 aa30.67■■■□□ 2.5
SMDT1-203ENST00000484235 ADAMTS4O75173 837 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 EIF3JO75822 258 aaKnown RBP30.66■■■□□ 2.5
SMDT1-203ENST00000484235 SMPD1P17405 629 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 RBM25P49756 843 aaKnown RBP30.66■■■□□ 2.5
SMDT1-203ENST00000484235 NAPAP54920 295 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 STK3Q13188 491 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 PPP1R18Q6NYC8 613 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 PHKBQ93100 1093 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 PDCD2LQ9BRP1 358 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 RNF26Q9BY78 433 aaPredicted RBP30.66■■■□□ 2.5
SMDT1-203ENST00000484235 WDR11Q9BZH6 1224 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 UPF2Q9HAU5 1272 aaKnown RBP30.66■■■□□ 2.5
SMDT1-203ENST00000484235 GNEQ9Y223 722 aaKnown RBP30.66■■■□□ 2.5
SMDT1-203ENST00000484235 SYNRGQ9UMZ2 1314 aa30.66■■■□□ 2.5
SMDT1-203ENST00000484235 STXBP3O00186 592 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 CPLX1O14810 134 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 SCG2P13521 617 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 GJA9P57773 515 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 VSIG10LQ86VR7 867 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 SCFD2Q8WU76 684 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 Q9Y3F1 56 aa30.65■■■□□ 2.5
SMDT1-203ENST00000484235 PGM5Q15124 567 aa30.64■■■□□ 2.5
SMDT1-203ENST00000484235 DUSP28Q4G0W2 176 aa30.64■■■□□ 2.5
SMDT1-203ENST00000484235 CPLX2Q6PUV4 134 aaKnown RBP30.64■■■□□ 2.5
SMDT1-203ENST00000484235 KLHDC9Q8NEP7 349 aa30.64■■■□□ 2.5
SMDT1-203ENST00000484235 SLC26A6Q9BXS9 759 aa30.64■■■□□ 2.5
SMDT1-203ENST00000484235 UPF3AQ9H1J1 476 aaKnown RBP30.64■■■□□ 2.5
SMDT1-203ENST00000484235 SLKQ9H2G2 1235 aaPredicted RBP30.64■■■□□ 2.5
SMDT1-203ENST00000484235 PFKFB2O60825 505 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 NKX3-2P78367 333 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 PKN1Q16512 942 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 TYW1BQ6NUM6 668 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 KIF2CQ99661 725 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 TSEN34Q9BSV6 310 aaKnown RBP30.63■■■□□ 2.49
SMDT1-203ENST00000484235 SENP6Q9GZR1 1112 aaPredicted RBP30.63■■■□□ 2.49
SMDT1-203ENST00000484235 RIC8AQ9NPQ8 531 aa30.63■■■□□ 2.49
SMDT1-203ENST00000484235 MYCLP12524 364 aaPredicted RBP30.62■■■□□ 2.49
SMDT1-203ENST00000484235 TRIM22Q8IYM9 498 aa30.62■■■□□ 2.49
SMDT1-203ENST00000484235 AP5M1Q9H0R1 490 aa30.62■■■□□ 2.49
SMDT1-203ENST00000484235 GLT8D2Q9H1C3 349 aa30.62■■■□□ 2.49
SMDT1-203ENST00000484235 SMCO2A6NFE2 343 aa30.61■■■□□ 2.49
SMDT1-203ENST00000484235 DYNC1LI2O43237 492 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-203ENST00000484235 EVI5O60447 810 aa30.61■■■□□ 2.49
SMDT1-203ENST00000484235 C6orf222P0C671 652 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-203ENST00000484235 CST5P28325 142 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-203ENST00000484235 CCND2P30279 289 aa30.61■■■□□ 2.49
SMDT1-203ENST00000484235 SSRP1Q08945 709 aaKnown RBP30.61■■■□□ 2.49
SMDT1-203ENST00000484235 SCRN1Q12765 414 aa30.61■■■□□ 2.49
SMDT1-203ENST00000484235 TTLL4Q14679 1199 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms