RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MAP3K21Q5TCX8 1036 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 WDR78Q5VTH9 848 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 NECAB2Q7Z6G3 386 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 IFNL3Q8IZI9 196 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 SLC44A5Q8NCS7 719 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 PI4K2BQ8TCG2 481 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 USP6NLQ92738 828 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 DPF3Q92784 378 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 DYNLL2Q96FJ2 89 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 DEFB118Q96PH6 123 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 CRBNQ96SW2 442 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 GRIP2Q9C0E4 1043 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 SPATC1LQ9H0A9 340 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTCD3-215ENST00000484203 HELLSQ9NRZ9 838 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 NRBP1Q9UHY1 535 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 CTDP1Q9Y5B0 961 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-215ENST00000484203 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 ROBO3Q96MS0 1386 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 MYH13Q9UKX3 1938 aa7.31□□□□□ -1.24
PTCD3-215ENST00000484203 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 MINDY4BA8MYZ0 360 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 TTLL1O95922 423 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 TSPY3P0CV98 308 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 TSPY8P0CW00 308 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 FCER1AP12319 257 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 EEF2P13639 858 aaKnown RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 RHOQP17081 205 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 CYP2B6P20813 491 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 SMTNP53814 917 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 PDE1AP54750 535 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 GRB14Q14449 540 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 SHROOM1Q2M3G4 852 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 CRTC2Q53ET0 693 aaPredicted RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 OLFML2BQ68BL8 750 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 TMEM214Q6NUQ4 689 aaKnown RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 UBE2Q1Q7Z7E8 422 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 DPP9Q86TI2 863 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 SMC5Q8IY18 1101 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 PRPF38AQ8NAV1 312 aaKnown RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 MKL1Q969V6 931 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 YTHDC1Q96MU7 727 aaKnown RBP7.3□□□□□ -1.24
PTCD3-215ENST00000484203 PORCNQ9H237 461 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 ZNF358Q9NW07 568 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 PNMA2Q9UL42 364 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 MAST2Q6P0Q8 1798 aa7.3□□□□□ -1.24
PTCD3-215ENST00000484203 MKI67P46013 3256 aaKnown RBP7.29□□□□□ -1.24
PTCD3-215ENST00000484203 F5H6K3 240 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ZBED4O75132 1171 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 CNMDO75829 334 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ERCC3P19447 782 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 OAZ1P54368 228 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 PTSQ03393 145 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 KLRC3Q07444 240 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 PPARAQ07869 468 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 POU4F2Q12837 409 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 PTK7Q13308 1070 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 PLS1Q14651 629 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 KCTD2Q14681 263 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ALX1Q15699 326 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 TSHZ3Q63HK5 1081 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SIAH1Q8IUQ4 282 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SPICE1Q8N0Z3 855 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SIX5Q8N196 739 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 MSL3Q8N5Y2 521 aaKnown RBP7.29□□□□□ -1.24
PTCD3-215ENST00000484203 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 CHURC1Q8WUH1 139 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 TRIB2Q92519 343 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SHISA4Q96DD7 197 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ARID3AQ99856 593 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SLF1Q9BQI6 1058 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 MOV10L1Q9BXT6 1211 aaKnown RBP7.29□□□□□ -1.24
PTCD3-215ENST00000484203 TEX13BQ9BXU2 312 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 MTMR4Q9NYA4 1195 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 BTBD7Q9P203 1132 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 FBXO40Q9UH90 709 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ANAPC4Q9UJX5 808 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 FEM1BQ9UK73 627 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 OGDHLQ9ULD0 1010 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 ADAMTS5Q9UNA0 930 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 DIS3Q9Y2L1 958 aaKnown RBP7.29□□□□□ -1.24
PTCD3-215ENST00000484203 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 TNRC18O15417 2968 aaPredicted RBP7.29□□□□□ -1.24
PTCD3-215ENST00000484203 AK9Q5TCS8 1911 aa7.29□□□□□ -1.24
PTCD3-215ENST00000484203 SALL3Q9BXA9 1300 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 CYP2D7A0A087X1C5 515 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 A0A1W2PPC1 479 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 A6NJY4 79 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 M0R2C6 588 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 VWA5AO00534 786 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 ATP2A1O14983 1001 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 ADORA2AP29274 412 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 STAT3P40763 770 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 NUCB1Q02818 461 aa7.28□□□□□ -1.24
PTCD3-215ENST00000484203 CACNB2Q08289 660 aaPredicted RBP7.28□□□□□ -1.24
PTCD3-215ENST00000484203 DPYDQ12882 1025 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms