RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
CPSF4-213ENST00000484112 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
CPSF4-213ENST00000484112 Q9Y3F1 56 aa11.69□□□□□ -0.54
CPSF4-213ENST00000484112 PCDHA11Q9Y5I1 949 aa11.69□□□□□ -0.54
CPSF4-213ENST00000484112 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
CPSF4-213ENST00000484112 MYO9BQ13459 2157 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 NMT2O60551 498 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 KDM4AO75164 1064 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 TTLL4Q14679 1199 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 FAM47CQ5HY64 1035 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 TMEM67Q5HYA8 995 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 PPP1R13LQ8WUF5 828 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-213ENST00000484112 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 WDR11Q9BZH6 1224 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 VTA1Q9NP79 307 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 ANO2Q9NQ90 1003 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
CPSF4-213ENST00000484112 ZSWIM5Q9P217 1185 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
CPSF4-213ENST00000484112 RBM8AQ9Y5S9 174 aaKnown RBP11.68□□□□□ -0.54
CPSF4-213ENST00000484112 TNKSO95271 1327 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 B4E1Z4 1266 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-213ENST00000484112 REC8O95072 547 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 CA3P07451 260 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 SUPT20HL2P0C7V6 817 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 SLC16A2P36021 539 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 KCNQ1P51787 676 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 BAATQ14032 418 aaPredicted RBP11.67□□□□□ -0.54
CPSF4-213ENST00000484112 SART3Q15020 963 aaKnown RBP11.67□□□□□ -0.54
CPSF4-213ENST00000484112 NECTIN1Q15223 517 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 TTBK2Q6IQ55 1244 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
CPSF4-213ENST00000484112 OR6J1Q8NGC5 347 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 TMEM47Q9BQJ4 181 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
CPSF4-213ENST00000484112 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
CPSF4-213ENST00000484112 ERICH2A1L162 156 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 PTPDC1A2A3K4 754 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 E7EWF7 191 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 ICAM1P05362 532 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 PFKMP08237 780 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 SNHG28P0DPA3 235 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 ACTN1P12814 892 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 BMP1P13497 986 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 CALML3P27482 149 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 ALDH5A1P51649 535 aaPredicted RBP11.66□□□□□ -0.54
CPSF4-213ENST00000484112 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 GPATCH4Q5T3I0 446 aaKnown RBP11.66□□□□□ -0.54
CPSF4-213ENST00000484112 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 SKAP1Q86WV1 359 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 FAM122AQ96E09 287 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPSF4-213ENST00000484112 PRUNE2Q8WUY3 3088 aa11.66□□□□□ -0.54
CPSF4-213ENST00000484112 FRMPD2Q68DX3 1309 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-213ENST00000484112 NFIBO00712 420 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 CPT1AP50416 773 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
CPSF4-213ENST00000484112 KRT32Q14532 448 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 KRT40Q6A162 431 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 ENAHQ8N8S7 591 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-213ENST00000484112 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 MTG1Q9BT17 334 aaPredicted RBP11.65□□□□□ -0.54
CPSF4-213ENST00000484112 KAT14Q9H8E8 782 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 MTCH2Q9Y6C9 303 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 GBF1Q92538 1859 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 TTC28Q96AY4 2481 aa11.65□□□□□ -0.54
CPSF4-213ENST00000484112 TCF20Q9UGU0 1960 aaKnown RBP11.65□□□□□ -0.55
CPSF4-213ENST00000484112 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 SLC27A2O14975 620 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 HMGB1P09429 215 aaKnown RBP11.64□□□□□ -0.55
CPSF4-213ENST00000484112 PDHBP11177 359 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 MCM5P33992 734 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 PLA2G5P39877 138 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 PDE4DQ08499 809 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 BRDTQ58F21 947 aaPredicted RBP11.64□□□□□ -0.55
CPSF4-213ENST00000484112 IFIT1BQ5T764 474 aaKnown RBP11.64□□□□□ -0.55
CPSF4-213ENST00000484112 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 COPS5Q92905 334 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 SLC9A7Q96T83 725 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 C1QTNF1Q9BXJ1 281 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 MAF1Q9H063 256 aa11.64□□□□□ -0.55
CPSF4-213ENST00000484112 RANBP17Q9H2T7 1088 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms