RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 U2AF2P26368 475 aaKnown RBP eCLIP16.15■□□□□ 0.182e-25■■□□□ 12.2
SRSF6-202ENST00000483871 MAP2K5Q13163 448 aa16.15■□□□□ 0.18
SRSF6-202ENST00000483871 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
SRSF6-202ENST00000483871 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
SRSF6-202ENST00000483871 USP6NLQ92738 828 aa16.15■□□□□ 0.18
SRSF6-202ENST00000483871 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
SRSF6-202ENST00000483871 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
SRSF6-202ENST00000483871 CASP8AP2Q9UKL3 1982 aa16.15■□□□□ 0.18
SRSF6-202ENST00000483871 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
SRSF6-202ENST00000483871 EDIL3O43854 480 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 HSPA8P11142 646 aaKnown RBP16.14■□□□□ 0.18
SRSF6-202ENST00000483871 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.18
SRSF6-202ENST00000483871 FLT3LGP49771 235 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 PRKCZQ05513 592 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 AP3B2Q13367 1082 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 TBCKQ8TEA7 893 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 PXMP2Q9NR77 195 aa16.14■□□□□ 0.18
SRSF6-202ENST00000483871 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
SRSF6-202ENST00000483871 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
SRSF6-202ENST00000483871 LBX1P52954 281 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 CCL14Q16627 93 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 INF2Q27J81 1249 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 NOSTRINQ8IVI9 506 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 IL31RAQ8NI17 732 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 MAF1Q9H063 256 aa16.14■□□□□ 0.17
SRSF6-202ENST00000483871 HTTP42858 3142 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 BRD1O95696 1058 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 ALDH5A1P51649 535 aaPredicted RBP16.13■□□□□ 0.17
SRSF6-202ENST00000483871 RESTQ13127 1097 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 PGM5Q15124 567 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 NONOQ15233 471 aaKnown RBP eCLIP16.13■□□□□ 0.17
SRSF6-202ENST00000483871 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
SRSF6-202ENST00000483871 PDCD2LQ9BRP1 358 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 FLRT1Q9NZU1 646 aa16.13■□□□□ 0.17
SRSF6-202ENST00000483871 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 WNT7AO00755 349 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 NR3C2P08235 984 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
SRSF6-202ENST00000483871 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 FOXD4L6Q3SYB3 417 aaPredicted RBP16.12■□□□□ 0.17
SRSF6-202ENST00000483871 FOXD4L3Q6VB84 417 aaPredicted RBP16.12■□□□□ 0.17
SRSF6-202ENST00000483871 SOCS4Q8WXH5 440 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 MAML3Q96JK9 1138 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
SRSF6-202ENST00000483871 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 TRIM17Q9Y577 477 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
SRSF6-202ENST00000483871 F13A1P00488 732 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 HOXC6P09630 235 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 SREBF1P36956 1147 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 RGS2P41220 211 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 OTOP1Q7RTM1 612 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 CRYGNQ8WXF5 182 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 RTEL1Q9NZ71 1219 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
SRSF6-202ENST00000483871 HOXD10P28358 340 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 TOB1P50616 345 aaPredicted RBP16.11■□□□□ 0.17
SRSF6-202ENST00000483871 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
SRSF6-202ENST00000483871 NBR1Q14596 966 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 EEPD1Q7L9B9 569 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 CYP2W1Q8TAV3 490 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
SRSF6-202ENST00000483871 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
SRSF6-202ENST00000483871 MCM3APO60318 1980 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 CTCFP49711 727 aaPredicted RBP16.1■□□□□ 0.17
SRSF6-202ENST00000483871 NUCB2P80303 420 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 VSIG10LQ86VR7 867 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 APBA2Q99767 749 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
SRSF6-202ENST00000483871 BRCA2P51587 3418 aa16.1■□□□□ 0.17
SRSF6-202ENST00000483871 ZNF236Q9UL36 1845 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 EDNRBP24530 442 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 MYSM1Q5VVJ2 828 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 CHMP5Q9NZZ3 219 aa16.09■□□□□ 0.17
SRSF6-202ENST00000483871 FAM86B1E9PN63 330 aa16.08■□□□□ 0.17
SRSF6-202ENST00000483871 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.17
SRSF6-202ENST00000483871 TDP2O95551 362 aa16.08■□□□□ 0.17
SRSF6-202ENST00000483871 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.17
SRSF6-202ENST00000483871 GNRH1P01148 92 aa16.08■□□□□ 0.17
SRSF6-202ENST00000483871 FAM86B2P0C5J1 330 aa16.08■□□□□ 0.17
SRSF6-202ENST00000483871 XRCC5P13010 732 aaKnown RBP16.08■□□□□ 0.17
SRSF6-202ENST00000483871 ELNP15502 786 aa16.08■□□□□ 0.17
SRSF6-202ENST00000483871 CYP2C19P33261 490 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms