RNA–Protein interactions for RNA: ENST00000483831.1

ABCB1-206, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 642 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-206ENST00000483831 BNC2Q6ZN30 1099 aaPredicted RBP7.54□□□□□ -1.2
ABCB1-206ENST00000483831 CCDC81Q6ZN84 652 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 LRP10Q7Z4F1 713 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 DDX54Q8TDD1 881 aaKnown RBP7.54□□□□□ -1.2
ABCB1-206ENST00000483831 LIN37Q96GY3 246 aaPredicted RBP7.54□□□□□ -1.2
ABCB1-206ENST00000483831 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
ABCB1-206ENST00000483831 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
ABCB1-206ENST00000483831 F13A1P00488 732 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 INHBBP09529 407 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
ABCB1-206ENST00000483831 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 GATAD2BQ8WXI9 593 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 SYTL4Q96C24 671 aaPredicted RBP7.53□□□□□ -1.2
ABCB1-206ENST00000483831 MIR1-1HGQ9H1L0 117 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 PCDHB5Q9Y5E4 795 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 KTN1Q86UP2 1357 aaKnown RBP7.53□□□□□ -1.2
ABCB1-206ENST00000483831 USP47Q96K76 1375 aa7.53□□□□□ -1.2
ABCB1-206ENST00000483831 TMEM265A0A087WTH1 108 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 FAM221AA4D161 298 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.52□□□□□ -1.21
ABCB1-206ENST00000483831 NFIBO00712 420 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 SMAD7O15105 426 aaKnown RBP7.52□□□□□ -1.21
ABCB1-206ENST00000483831 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
ABCB1-206ENST00000483831 CTSBP07858 339 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 C1QTNF9P0C862 333 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 LMNB1P20700 586 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 FSTL1Q12841 308 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 MPP2Q14168 576 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 POU4F3Q15319 338 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 NME9Q86XW9 330 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 GPATCH3Q96I76 525 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 RNPC3Q96LT9 517 aaKnown RBP7.52□□□□□ -1.21
ABCB1-206ENST00000483831 MSRB2Q9Y3D2 182 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 SAMM50Q9Y512 469 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 KCPQ6ZWJ8 1503 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 EVC2Q86UK5 1308 aa7.52□□□□□ -1.21
ABCB1-206ENST00000483831 PALLDQ8WX93 1383 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 FAM221BA6H8Z2 402 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 BMP6P22004 513 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 GIPRP48546 466 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 EIF6P56537 245 aaKnown RBP7.51□□□□□ -1.21
ABCB1-206ENST00000483831 PPP2R3AQ06190 1150 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
ABCB1-206ENST00000483831 RASIP1Q5U651 963 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 ARHGAP27Q6ZUM4 889 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 SMIM5Q71RC9 77 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 FAM169BQ8N8A8 192 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
ABCB1-206ENST00000483831 CYP8B1Q9UNU6 501 aa7.51□□□□□ -1.21
ABCB1-206ENST00000483831 C4AP0C0L4 1744 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 PLEKHG2Q9H7P9 1386 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 MAFGO15525 162 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 CILPO75339 1184 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 HSPA1AP0DMV8 641 aaKnown RBP7.5□□□□□ -1.21
ABCB1-206ENST00000483831 HSPA1BP0DMV9 641 aaKnown RBP7.5□□□□□ -1.21
ABCB1-206ENST00000483831 NME2P22392 152 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 MCM4P33991 863 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 ZNF165P49910 485 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
ABCB1-206ENST00000483831 PTPROQ16827 1216 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 EXOC8Q8IYI6 725 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 CELF2-AS1Q8N7Q2 184 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 OR6P1Q8NGX9 317 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 IP6K1Q92551 441 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
ABCB1-206ENST00000483831 FERD3LQ96RJ6 166 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
ABCB1-206ENST00000483831 B3GALT4O96024 378 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 CEACAM5P06731 702 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 AFMP43652 599 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 SEPT6Q14141 434 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 NOL8Q76FK4 1167 aaKnown RBP7.49□□□□□ -1.21
ABCB1-206ENST00000483831 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.49□□□□□ -1.21
ABCB1-206ENST00000483831 ZCRB1Q8TBF4 217 aaKnown RBP7.49□□□□□ -1.21
ABCB1-206ENST00000483831 KCNB2Q92953 911 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 EDC4Q6P2E9 1401 aaKnown RBP7.49□□□□□ -1.21
ABCB1-206ENST00000483831 NSD3Q9BZ95 1437 aa7.49□□□□□ -1.21
ABCB1-206ENST00000483831 CCDC85CA6NKD9 419 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 KRT1P04264 644 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 GLI1P08151 1106 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 COL5A3P25940 1745 aaPredicted RBP7.48□□□□□ -1.21
ABCB1-206ENST00000483831 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 LRRC14Q15048 493 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 DDR2Q16832 855 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 MPZL3Q6UWV2 235 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 REXO1Q8N1G1 1221 aaKnown RBP7.48□□□□□ -1.21
ABCB1-206ENST00000483831 CRBNQ96SW2 442 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 CORO1BQ9BR76 489 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 ACTR10Q9NZ32 417 aa7.48□□□□□ -1.21
ABCB1-206ENST00000483831 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms