RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 MORF4L1Q9UBU8 362 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 CEP131Q9UPN4 1083 aa17.11■□□□□ 0.33
PHGDH-205ENST00000482968 SPTLC2O15270 562 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 COPB2P35606 906 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 SREBF1P36956 1147 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 USP11P51784 963 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 MROH8Q9H579 483 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 LMBRD1Q9NUN5 540 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 RBBP6Q7Z6E9 1792 aaKnown RBP17.1■□□□□ 0.33
PHGDH-205ENST00000482968 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 TDP2O95551 362 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 ME1P48163 572 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 PTGDRQ13258 359 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 TMEM87AQ8NBN3 555 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 CRYGNQ8WXF5 182 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
PHGDH-205ENST00000482968 TLR2O60603 784 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-205ENST00000482968 VEGFBP49765 207 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 CRHR2Q13324 411 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 SHCBP1Q8NEM2 672 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 KCNG4Q8TDN1 519 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 ELP1O95163 1332 aa17.09■□□□□ 0.33
PHGDH-205ENST00000482968 EIF2AK2P19525 551 aaKnown RBP17.08■□□□□ 0.33
PHGDH-205ENST00000482968 ZNF76P36508 570 aa17.08■□□□□ 0.33
PHGDH-205ENST00000482968 ARHGEF16Q5VV41 709 aa17.08■□□□□ 0.33
PHGDH-205ENST00000482968 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-205ENST00000482968 MMP19Q99542 508 aa17.08■□□□□ 0.33
PHGDH-205ENST00000482968 MAF1Q9H063 256 aa17.08■□□□□ 0.33
PHGDH-205ENST00000482968 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.33
PHGDH-205ENST00000482968 PFASO15067 1338 aa17.08■□□□□ 0.32
PHGDH-205ENST00000482968 ADGRA2Q96PE1 1338 aa17.08■□□□□ 0.32
PHGDH-205ENST00000482968 GOLGA6L4A6NEF3 574 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 CA12O43570 354 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 PPP6R2O75170 966 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 ECM2O94769 699 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 BMP15O95972 392 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 BCRP11274 1271 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 FCER1AP12319 257 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 CNTN2Q02246 1040 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 KCTD2Q14681 263 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 C17orf99Q6UX52 265 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 C4orf32Q8N8J7 132 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 DDX25Q9UHL0 483 aaKnown RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 ZNFX1Q9P2E3 1918 aaKnown RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 SLC37A4O43826 429 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 NEMFO60524 1076 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 CYP3A4P08684 503 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
PHGDH-205ENST00000482968 TMEM60Q9H2L4 133 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
PHGDH-205ENST00000482968 FAM86B1E9PN63 330 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 PGK2P07205 417 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 FAM86B2P0C5J1 330 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-205ENST00000482968 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
PHGDH-205ENST00000482968 MAP2K2P36507 400 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 PGM5Q15124 567 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
PHGDH-205ENST00000482968 CYP3A7-CYP3A51PA0A087WV96 503 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 CYP3A7P24462 503 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 CIITAP33076 1130 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 PRR16Q569H4 304 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 CLIC6Q96NY7 704 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 PDCD2LQ9BRP1 358 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 PTPREP23469 700 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 UBE2HP62256 183 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 GRIN1Q05586 938 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 ORC2Q13416 577 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 CALCRLQ16602 461 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 PCNX4Q63HM2 1172 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 GPR142Q7Z601 462 aa17.05■□□□□ 0.32
PHGDH-205ENST00000482968 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
PHGDH-205ENST00000482968 STRNO43815 780 aa17.04■□□□□ 0.32
PHGDH-205ENST00000482968 MARCH6O60337 910 aa17.04■□□□□ 0.32
PHGDH-205ENST00000482968 TBC1D8O95759 1140 aa17.04■□□□□ 0.32
PHGDH-205ENST00000482968 NR3C2P08235 984 aa17.04■□□□□ 0.32
PHGDH-205ENST00000482968 MAPK4P31152 587 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms