RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 A0A1W2PQD8 194 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 U2SURPO15042 1029 aaKnown RBP5.16□□□□□ -1.58
SNX27-205ENST00000482791 SUV39H1O43463 412 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 ITGAVP06756 1048 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 SCRN1Q12765 414 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 VMACQ2NL98 169 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 ACBD5Q5T8D3 534 aaPredicted RBP5.16□□□□□ -1.58
SNX27-205ENST00000482791 SOGA3Q5TF21 947 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 UBXN4Q92575 508 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 EPB41L4AQ9HCS5 686 aaPredicted RBP5.16□□□□□ -1.58
SNX27-205ENST00000482791 LRP2BPQ9P2M1 347 aa5.16□□□□□ -1.58
SNX27-205ENST00000482791 CYBBP04839 570 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 KCNAB2Q13303 367 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 PUM1Q14671 1186 aaKnown RBP eCLIP5.15□□□□□ -1.59
SNX27-205ENST00000482791 LRP10Q7Z4F1 713 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 NPLOC4Q8TAT6 608 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 BTN2A2Q8WVV5 523 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 PPP1R14AQ96A00 147 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 CCDC113Q9H0I3 377 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 SIRPGQ9P1W8 387 aa5.15□□□□□ -1.59
SNX27-205ENST00000482791 THBDP07204 575 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 MAPKAPK2P49137 400 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 GALK1P51570 392 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 GFRA1P56159 465 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 CYP4F3Q08477 520 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 MAP4K2Q12851 820 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 RASGRF1Q13972 1273 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 PAQR3Q6TCH7 311 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 CABP7Q86V35 215 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 SIRT2Q8IXJ6 389 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 LRRC47Q8N1G4 583 aaKnown RBP5.14□□□□□ -1.59
SNX27-205ENST00000482791 DACT3Q96B18 629 aaPredicted RBP5.14□□□□□ -1.59
SNX27-205ENST00000482791 PUS7Q96PZ0 661 aaKnown RBP5.14□□□□□ -1.59
SNX27-205ENST00000482791 ST7Q9NRC1 585 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.14□□□□□ -1.59
SNX27-205ENST00000482791 KLHL14Q9P2G3 628 aa5.14□□□□□ -1.59
SNX27-205ENST00000482791 A0A1W2PQJ5 194 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 A0A1W2PQU0 124 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 OVOL3O00110 214 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 SMARCA5O60264 1052 aaPredicted RBP5.13□□□□□ -1.59
SNX27-205ENST00000482791 NPHS1O60500 1241 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 DBHP09172 617 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 MSL3P1P0C860 447 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 PLS3P13797 630 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 PI3P19957 117 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 GTF2A2P52657 109 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 PPP2R2AP63151 447 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 SRSF3P84103 164 aaKnown RBP5.13□□□□□ -1.59
SNX27-205ENST00000482791 SERINC3Q13530 473 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 HSP90AA2PQ14568 343 aaPredicted RBP5.13□□□□□ -1.59
SNX27-205ENST00000482791 KIR3DS1Q14943 382 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 RAB3GAP1Q15042 981 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 ZNF385BQ569K4 471 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 LZTR1Q8N653 840 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 NETO2Q8NC67 525 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 FRS2Q8WU20 508 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 MTA3Q9BTC8 594 aa5.13□□□□□ -1.59
SNX27-205ENST00000482791 C7orf72A4D263 438 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 TBX1O43435 398 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
SNX27-205ENST00000482791 GLI4P10075 376 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 VIPR1P32241 457 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 GTF2F1P35269 517 aaKnown RBP eCLIP5.12□□□□□ -1.59
SNX27-205ENST00000482791 PLEKHN1Q494U1 663 aaPredicted RBP5.12□□□□□ -1.59
SNX27-205ENST00000482791 SLC35F1Q5T1Q4 408 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 ZC3H14Q6PJT7 736 aaKnown RBP5.12□□□□□ -1.59
SNX27-205ENST00000482791 Q8N1Y9 231 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 KREMEN2Q8NCW0 462 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 KCTD13Q8WZ19 329 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 MKL1Q969V6 931 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 C1orf159Q96HA4 380 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 GPRC5CQ9NQ84 441 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 SIRT5Q9NXA8 310 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 CLEC1BQ9P126 229 aa5.12□□□□□ -1.59
SNX27-205ENST00000482791 MBD1Q9UIS9 605 aaPredicted RBP5.12□□□□□ -1.59
SNX27-205ENST00000482791 PDPK1O15530 556 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 MEFVO15553 781 aaPredicted RBP5.11□□□□□ -1.59
SNX27-205ENST00000482791 FGFR1P11362 822 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 SLC9A5Q14940 896 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 BICRALQ6AI39 1079 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 TMEM132EQ6IEE7 984 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 RSPO2Q6UXX9 243 aaPredicted RBP5.11□□□□□ -1.59
SNX27-205ENST00000482791 RPTNQ6XPR3 784 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 CPNE8Q86YQ8 564 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 DIO2Q92813 273 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 DNAJC2Q99543 621 aaKnown RBP5.11□□□□□ -1.59
SNX27-205ENST00000482791 AARSD1Q9BTE6 412 aaKnown RBP5.11□□□□□ -1.59
SNX27-205ENST00000482791 LGR4Q9BXB1 951 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 NUDT5Q9UKK9 219 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 NPFFR2Q9Y5X5 522 aa5.11□□□□□ -1.59
SNX27-205ENST00000482791 NUDT19A8MXV4 375 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 N4BP3O15049 544 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 MYO1BO43795 1136 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 SASH1O94885 1247 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 HSP90B1P14625 803 aaKnown RBP5.1□□□□□ -1.59
SNX27-205ENST00000482791 LTBRP36941 435 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 RPL11P62913 178 aaKnown RBP5.1□□□□□ -1.59
SNX27-205ENST00000482791 LONRF2Q1L5Z9 754 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 MBLAC2Q68D91 279 aa5.1□□□□□ -1.59
SNX27-205ENST00000482791 WWC2Q6AWC2 1192 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms