RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 LARP6Q9BRS8 491 aaKnown RBP19.1■□□□□ 0.65
HMGN1-214ENST00000482733 RNF26Q9BY78 433 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-214ENST00000482733 GLT8D2Q9H1C3 349 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 SLKQ9H2G2 1235 aaPredicted RBP19.1■□□□□ 0.65
HMGN1-214ENST00000482733 SPC25Q9HBM1 224 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 BARHL2Q9NY43 387 aa19.1■□□□□ 0.65
HMGN1-214ENST00000482733 SCG2P13521 617 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 NAPAP54920 295 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 TAPT1Q6NXT6 567 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 EEPD1Q7L9B9 569 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 RNF180Q86T96 592 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 FCHSD1Q86WN1 690 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 TRIM22Q8IYM9 498 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 IL27Q8NEV9 243 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 CCDC12Q8WUD4 166 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-214ENST00000482733 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.65
HMGN1-214ENST00000482733 PAWRQ96IZ0 340 aaKnown RBP19.09■□□□□ 0.65
HMGN1-214ENST00000482733 NCOA5Q9HCD5 579 aaKnown RBP19.09■□□□□ 0.65
HMGN1-214ENST00000482733 TPCN1Q9ULQ1 816 aa19.09■□□□□ 0.65
HMGN1-214ENST00000482733 BAZ2BQ9UIF8 2168 aaKnown RBP19.08■□□□□ 0.65
HMGN1-214ENST00000482733 RBM47A0AV96 593 aaKnown RBP19.08■□□□□ 0.64
HMGN1-214ENST00000482733 KBTBD13C9JR72 458 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 STXBP3O00186 592 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 MEIS2O14770 477 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 PFKFB2O60825 505 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 EIF3JO75822 258 aaKnown RBP19.08■□□□□ 0.64
HMGN1-214ENST00000482733 CDKL5O76039 1030 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 NR3C2P08235 984 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 EIF2AK2P19525 551 aaKnown RBP19.08■□□□□ 0.64
HMGN1-214ENST00000482733 ADCYAP1R1P41586 468 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.64
HMGN1-214ENST00000482733 STK3Q13188 491 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 SCFD2Q8WU76 684 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 PHKBQ93100 1093 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 PDCD2LQ9BRP1 358 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 HTATIP2Q9BUP3 242 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 SLC26A6Q9BXS9 759 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 C11orf49Q9H6J7 331 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 Q9Y3F1 56 aa19.08■□□□□ 0.64
HMGN1-214ENST00000482733 DDX49Q9Y6V7 483 aaKnown RBP19.08■□□□□ 0.64
HMGN1-214ENST00000482733 SSRP1Q08945 709 aaKnown RBP19.07■□□□□ 0.64
HMGN1-214ENST00000482733 LRRC41Q15345 812 aa19.07■□□□□ 0.64
HMGN1-214ENST00000482733 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
HMGN1-214ENST00000482733 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
HMGN1-214ENST00000482733 PDGFCQ9NRA1 345 aa19.07■□□□□ 0.64
HMGN1-214ENST00000482733 MYH6P13533 1939 aa19.07■□□□□ 0.64
HMGN1-214ENST00000482733 FRMPD4Q14CM0 1322 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 SYNRGQ9UMZ2 1314 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 ADAMTS4O75173 837 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 PGK1P00558 417 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 COL6A1P12109 1028 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 SMPD1P17405 629 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 CCND2P30279 289 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 GJA9P57773 515 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 SCRN1Q12765 414 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 PGM5Q15124 567 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 PKN1Q16512 942 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 DUSP28Q4G0W2 176 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 GJC2Q5T442 439 aaPredicted RBP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 VSIG10LQ86VR7 867 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 DIS3LQ8TF46 1054 aaKnown RBP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 KIF2CQ99661 725 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 TSEN34Q9BSV6 310 aaKnown RBP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 WDR11Q9BZH6 1224 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 UPF3AQ9H1J1 476 aaKnown RBP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 RIC8AQ9NPQ8 531 aa19.06■□□□□ 0.64
HMGN1-214ENST00000482733 GNEQ9Y223 722 aaKnown RBP19.06■□□□□ 0.64
HMGN1-214ENST00000482733 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-214ENST00000482733 SMCO2A6NFE2 343 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 SPDYE3A6NKU9 549 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 STAM2O75886 525 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 DEXIO95424 95 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-214ENST00000482733 CST5P28325 142 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-214ENST00000482733 ADCY7P51828 1080 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 NKX3-2P78367 333 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 TTLL4Q14679 1199 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 RABEP1Q15276 862 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 TYW1BQ6NUM6 668 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 XRRA1Q6P2D8 792 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 LENG1Q96BZ8 264 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-214ENST00000482733 AP5M1Q9H0R1 490 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 EHMT1Q9H9B1 1298 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 LCTP09848 1927 aa19.05■□□□□ 0.64
HMGN1-214ENST00000482733 ESYT2A0FGR8 921 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 ADCY6O43306 1168 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 FOSP01100 380 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-214ENST00000482733 MYCLP12524 364 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-214ENST00000482733 KCNV1Q6PIU1 500 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 TLK2Q86UE8 772 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 FAM177A1Q8N128 213 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-214ENST00000482733 PCSK9Q8NBP7 692 aaKnown RBP19.04■□□□□ 0.64
HMGN1-214ENST00000482733 KLHDC9Q8NEP7 349 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 CCDC148Q8NFR7 591 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 BACH2Q9BYV9 841 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 C6orf50Q9HD87 102 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 SH3GLB2Q9NR46 395 aa19.04■□□□□ 0.64
HMGN1-214ENST00000482733 MOXD2PA6NHM9 499 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms