RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SLC26A6Q9BXS9 759 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 RNF26Q9BY78 433 aaPredicted RBP24.08■■□□□ 1.45
SEC13-217ENST00000482647 PXMP2Q9NR77 195 aa24.08■■□□□ 1.45
SEC13-217ENST00000482647 RBBP6Q7Z6E9 1792 aaKnown RBP24.08■■□□□ 1.44
SEC13-217ENST00000482647 PFKFB2O60825 505 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 NAPAP54920 295 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 IQSEC1Q6DN90 963 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 PPP1R18Q6NYC8 613 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 FBXO16Q8IX29 292 aaPredicted RBP24.07■■□□□ 1.44
SEC13-217ENST00000482647 TRIM22Q8IYM9 498 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 KIF2CQ99661 725 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 XPNPEP3Q9NQH7 507 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 BARHL2Q9NY43 387 aa24.07■■□□□ 1.44
SEC13-217ENST00000482647 MYH6P13533 1939 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 DUSP11O75319 330 aaKnown RBP24.06■■□□□ 1.44
SEC13-217ENST00000482647 SCG2P13521 617 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 EIF2AK2P19525 551 aaKnown RBP24.06■■□□□ 1.44
SEC13-217ENST00000482647 TNFAIP2Q03169 654 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 STXBP2Q15833 593 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 TAPT1Q6NXT6 567 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 USP17L6PQ6QN14 398 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 UBE2Q1Q7Z7E8 422 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 TEX2Q8IWB9 1127 aa24.06■■□□□ 1.44
SEC13-217ENST00000482647 STXBP3O00186 592 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 MEIS2O14770 477 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 EIF3JO75822 258 aaKnown RBP24.05■■□□□ 1.44
SEC13-217ENST00000482647 CDKL5O76039 1030 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 NR3C2P08235 984 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 SSRP1Q08945 709 aaKnown RBP24.05■■□□□ 1.44
SEC13-217ENST00000482647 SCRN1Q12765 414 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 NOL8Q76FK4 1167 aaKnown RBP24.05■■□□□ 1.44
SEC13-217ENST00000482647 NECAB2Q7Z6G3 386 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 PAWRQ96IZ0 340 aaKnown RBP24.05■■□□□ 1.44
SEC13-217ENST00000482647 BACH2Q9BYV9 841 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 GLT8D2Q9H1C3 349 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 PDGFCQ9NRA1 345 aa24.05■■□□□ 1.44
SEC13-217ENST00000482647 ADCYAP1R1P41586 468 aa24.04■■□□□ 1.44
SEC13-217ENST00000482647 MNX1P50219 401 aaPredicted RBP24.04■■□□□ 1.44
SEC13-217ENST00000482647 PKN1Q16512 942 aa24.04■■□□□ 1.44
SEC13-217ENST00000482647 RNF180Q86T96 592 aa24.04■■□□□ 1.44
SEC13-217ENST00000482647 CCDC12Q8WUD4 166 aaPredicted RBP24.04■■□□□ 1.44
SEC13-217ENST00000482647 PDCD2LQ9BRP1 358 aa24.04■■□□□ 1.44
SEC13-217ENST00000482647 RBM47A0AV96 593 aaKnown RBP24.03■■□□□ 1.44
SEC13-217ENST00000482647 SMCO2A6NFE2 343 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 DNM1LO00429 736 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 PPFIA3O75145 1194 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 MYCNP04198 464 aaPredicted RBP24.03■■□□□ 1.44
SEC13-217ENST00000482647 RABEP1Q15276 862 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 TYW1BQ6NUM6 668 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 LENG1Q96BZ8 264 aaPredicted RBP24.03■■□□□ 1.44
SEC13-217ENST00000482647 SPC25Q9HBM1 224 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 RIC8AQ9NPQ8 531 aa24.03■■□□□ 1.44
SEC13-217ENST00000482647 PGK1P00558 417 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 SMPD1P17405 629 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 ADCY7P51828 1080 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 PGM5Q15124 567 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 ME3Q16798 604 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 GJC2Q5T442 439 aaPredicted RBP24.02■■□□□ 1.44
SEC13-217ENST00000482647 VSIG10LQ86VR7 867 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 IL27Q8NEV9 243 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 DIS3LQ8TF46 1054 aaKnown RBP24.02■■□□□ 1.44
SEC13-217ENST00000482647 SCFD2Q8WU76 684 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 TBC1D32Q96NH3 1257 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 WDR11Q9BZH6 1224 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 C11orf49Q9H6J7 331 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 LIMCH1Q9UPQ0 1083 aa24.02■■□□□ 1.44
SEC13-217ENST00000482647 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.01■■□□□ 1.43
SEC13-217ENST00000482647 SPDYE3A6NKU9 549 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 KBTBD13C9JR72 458 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 ADCY6O43306 1168 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 MYCLP12524 364 aaPredicted RBP24.01■■□□□ 1.43
SEC13-217ENST00000482647 CCND2P30279 289 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 LRRC41Q15345 812 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 GNEQ9Y223 722 aaKnown RBP24.01■■□□□ 1.43
SEC13-217ENST00000482647 Q9Y3F1 56 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 SYNRGQ9UMZ2 1314 aa24.01■■□□□ 1.43
SEC13-217ENST00000482647 DEXIO95424 95 aa24■■□□□ 1.43
SEC13-217ENST00000482647 UBE2SQ16763 222 aa24■■□□□ 1.43
SEC13-217ENST00000482647 DUSP28Q4G0W2 176 aa24■■□□□ 1.43
SEC13-217ENST00000482647 SEPT14Q6ZU15 432 aa24■■□□□ 1.43
SEC13-217ENST00000482647 NECAB1Q8N987 351 aa24■■□□□ 1.43
SEC13-217ENST00000482647 GTF3C6Q969F1 213 aa24■■□□□ 1.43
SEC13-217ENST00000482647 AP5M1Q9H0R1 490 aa24■■□□□ 1.43
SEC13-217ENST00000482647 C6orf50Q9HD87 102 aa24■■□□□ 1.43
SEC13-217ENST00000482647 LCTP09848 1927 aa24■■□□□ 1.43
SEC13-217ENST00000482647 ESYT2A0FGR8 921 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 ADAMTS4O75173 837 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 C6orf222P0C671 652 aaPredicted RBP23.99■■□□□ 1.43
SEC13-217ENST00000482647 GJA9P57773 515 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 TTLL4Q14679 1199 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 XRRA1Q6P2D8 792 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 CCDC148Q8NFR7 591 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 HTATIP2Q9BUP3 242 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 UPF3AQ9H1J1 476 aaKnown RBP23.99■■□□□ 1.43
SEC13-217ENST00000482647 SH3GLB2Q9NR46 395 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 FRMPD4Q14CM0 1322 aa23.99■■□□□ 1.43
SEC13-217ENST00000482647 NKRFO15226 690 aaKnown RBP eCLIP23.98■■□□□ 1.43
SEC13-217ENST00000482647 DYNC1LI2O43237 492 aaPredicted RBP23.98■■□□□ 1.43
SEC13-217ENST00000482647 STAM2O75886 525 aa23.98■■□□□ 1.43
SEC13-217ENST00000482647 FOSP01100 380 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms