RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 HEATR3Q7Z4Q2 680 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 SMARCC2Q8TAQ2 1214 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 RNF26Q9BY78 433 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-212ENST00000482152 C22orf23Q9BZE7 217 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 BARHL2Q9NY43 387 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 MYH6P13533 1939 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 CPLX1O14810 134 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 STAM2O75886 525 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 NR3C2P08235 984 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 COL6A1P12109 1028 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
CCDC78-212ENST00000482152 NEK4P51957 841 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 GJA9P57773 515 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 LRRC41Q15345 812 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 NTRK3Q16288 839 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 PFKFB3Q16875 520 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-212ENST00000482152 XRRA1Q6P2D8 792 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 TRIM22Q8IYM9 498 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 SCFD2Q8WU76 684 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 CCDC12Q8WUD4 166 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-212ENST00000482152 PDCD2LQ9BRP1 358 aa18.8■□□□□ 0.6
CCDC78-212ENST00000482152 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
CCDC78-212ENST00000482152 MEIS2O14770 477 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 CDKL5O76039 1030 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 SCG2P13521 617 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 CST5P28325 142 aaPredicted RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 DUSP28Q4G0W2 176 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 MCTP2Q6DN12 878 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 KCNV1Q6PIU1 500 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 VSIG10LQ86VR7 867 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 FAM177A1Q8N128 213 aaPredicted RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 PCSK9Q8NBP7 692 aaKnown RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 WDR11Q9BZH6 1224 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 AP5M1Q9H0R1 490 aa18.79■□□□□ 0.6
CCDC78-212ENST00000482152 SLKQ9H2G2 1235 aaPredicted RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 GNEQ9Y223 722 aaKnown RBP18.79■□□□□ 0.6
CCDC78-212ENST00000482152 BRCA2P51587 3418 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 hCG_1642624A0A1W2PR95 340 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 MOXD2PA6NHM9 499 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 ADAMTS4O75173 837 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
CCDC78-212ENST00000482152 CCND2P30279 289 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 NAPAP54920 295 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 CCT2P78371 535 aaKnown RBP18.78■□□□□ 0.6
CCDC78-212ENST00000482152 TTLL4Q14679 1199 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 WWC2Q6AWC2 1192 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 EHMT1Q9H9B1 1298 aa18.78■□□□□ 0.6
CCDC78-212ENST00000482152 FRMPD4Q14CM0 1322 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 SYNRGQ9UMZ2 1314 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 BAZ2BQ9UIF8 2168 aaKnown RBP18.77■□□□□ 0.6
CCDC78-212ENST00000482152 STXBP3O00186 592 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 ZEB2O60315 1214 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 PFKFB2O60825 505 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 PGK1P00558 417 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 FOSP01100 380 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-212ENST00000482152 TGFB3P10600 412 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 SMPD1P17405 629 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 AK2P54819 239 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 SSRP1Q08945 709 aaKnown RBP18.77■□□□□ 0.6
CCDC78-212ENST00000482152 PGM5Q15124 567 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.6
CCDC78-212ENST00000482152 DIS3LQ8TF46 1054 aaKnown RBP18.77■□□□□ 0.6
CCDC78-212ENST00000482152 RIC8AQ9NPQ8 531 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 SH3GLB2Q9NR46 395 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
CCDC78-212ENST00000482152 ESYT2A0FGR8 921 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 SMCO2A6NFE2 343 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 C6orf222P0C671 652 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-212ENST00000482152 GNA11P29992 359 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 ADCY7P51828 1080 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 USP17L6PQ6QN14 398 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 TLK2Q86UE8 772 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 DPF3Q92784 378 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 GPKOWQ92917 476 aaPredicted RBP eCLIP18.76■□□□□ 0.59
CCDC78-212ENST00000482152 SLC26A6Q9BXS9 759 aa18.76■□□□□ 0.59
CCDC78-212ENST00000482152 SENP6Q9GZR1 1112 aaPredicted RBP18.76■□□□□ 0.59
CCDC78-212ENST00000482152 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
CCDC78-212ENST00000482152 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-212ENST00000482152 SPDYE3A6NKU9 549 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 DYNC1LI2O43237 492 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-212ENST00000482152 DEXIO95424 95 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 TXNP10599 105 aaKnown RBP18.75■□□□□ 0.59
CCDC78-212ENST00000482152 PKN1Q16512 942 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 BRDTQ58F21 947 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-212ENST00000482152 GNASQ5JWF2 1037 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 CCSAPQ6IQ19 270 aaPredicted RBP18.75■□□□□ 0.59
CCDC78-212ENST00000482152 CCDC148Q8NFR7 591 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 PHKBQ93100 1093 aa18.75■□□□□ 0.59
CCDC78-212ENST00000482152 LARP6Q9BRS8 491 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms