RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FCGRTP55899 365 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 GNL2Q13823 731 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 NPY5RQ15761 445 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 UBE2SQ16763 222 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 DIS3L2Q8IYB7 885 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
HPS4-212ENST00000481910 DAGLBQ8NCG7 672 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 MAF1Q9H063 256 aa13.25□□□□□ -0.29
HPS4-212ENST00000481910 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 PFASO15067 1338 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 BTBD18B2RXH4 712 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 PTPREP23469 700 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
HPS4-212ENST00000481910 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 SLC30A10Q6XR72 485 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 ZNF296Q8WUU4 475 aaPredicted RBP13.24□□□□□ -0.29
HPS4-212ENST00000481910 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
HPS4-212ENST00000481910 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 FKTNO75072 461 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 PGK2P07205 417 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 ADORA2AP29274 412 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 CTGFP29279 349 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 GHRHRQ02643 423 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 NR5A1Q13285 461 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 RASGRP4Q8TDF6 673 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 SYTL5Q8TDW5 730 aaPredicted RBP13.23□□□□□ -0.29
HPS4-212ENST00000481910 MGAMO43451 1857 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 PLXNB2O15031 1838 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 SLC15A5A6NIM6 579 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 M0R2N6 131 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 CLK2P49760 499 aaKnown RBP13.23□□□□□ -0.29
HPS4-212ENST00000481910 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 CD99L2Q8TCZ2 262 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 FOXP1Q9H334 677 aaPredicted RBP13.23□□□□□ -0.29
HPS4-212ENST00000481910 COL20A1Q9P218 1284 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
HPS4-212ENST00000481910 RBBP6Q7Z6E9 1792 aaKnown RBP13.23□□□□□ -0.29
HPS4-212ENST00000481910 FOSP01100 380 aaPredicted RBP13.22□□□□□ -0.29
HPS4-212ENST00000481910 CLCN1P35523 988 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 CNTN2Q02246 1040 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 PKP1Q13835 747 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 GRB14Q14449 540 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
HPS4-212ENST00000481910 ERO1AQ96HE7 468 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
HPS4-212ENST00000481910 TAAR1Q96RJ0 339 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
HPS4-212ENST00000481910 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.29
HPS4-212ENST00000481910 DDIT3P35638 169 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
HPS4-212ENST00000481910 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 FERMT3Q86UX7 667 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
HPS4-212ENST00000481910 RMDN3Q96TC7 470 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
HPS4-212ENST00000481910 KIF28PB7ZC32 967 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 COBLO75128 1261 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 CAP1Q01518 475 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 MAP2K5Q13163 448 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ARHGEF6Q15052 776 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 MORN1Q5T089 497 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 KRT25Q7Z3Z0 450 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 TNFRSF25Q93038 417 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ANO3Q9BYT9 981 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.3
HPS4-212ENST00000481910 GJD2Q9UKL4 321 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 PCNTO95613 3336 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.3
HPS4-212ENST00000481910 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
HPS4-212ENST00000481910 HOXD10P28358 340 aa13.2□□□□□ -0.3
HPS4-212ENST00000481910 UBXN2AP68543 259 aa13.2□□□□□ -0.3
HPS4-212ENST00000481910 NONOQ15233 471 aaKnown RBP eCLIP13.2□□□□□ -0.3
HPS4-212ENST00000481910 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
HPS4-212ENST00000481910 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
HPS4-212ENST00000481910 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
HPS4-212ENST00000481910 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
HPS4-212ENST00000481910 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 FOXN1O15353 648 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 GNRH1P01148 92 aa13.19□□□□□ -0.3
HPS4-212ENST00000481910 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms