RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
PTPN12-211ENST00000481154 PARD6AQ9NPB6 346 aa7.59□□□□□ -1.19
PTPN12-211ENST00000481154 R3HCC1Q9Y3T6 440 aaKnown RBP7.59□□□□□ -1.19
PTPN12-211ENST00000481154 KLF4O43474 513 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 DDAH1O94760 285 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 HOXA5P20719 270 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 MC3RP41968 323 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 ZNF143P52747 638 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-211ENST00000481154 CYP4F3Q08477 520 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 RBL2Q08999 1139 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 SV2CQ496J9 727 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
PTPN12-211ENST00000481154 CABP7Q86V35 215 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 MARCH10Q8NA82 808 aaPredicted RBP7.58□□□□□ -1.2
PTPN12-211ENST00000481154 USP33Q8TEY7 942 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 KCNC2Q96PR1 638 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 BTG4Q9NY30 223 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 USP35Q9P2H5 1018 aa7.58□□□□□ -1.2
PTPN12-211ENST00000481154 NPHS1O60500 1241 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 FUCA1P04066 466 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 ATF2P15336 505 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 INF2Q27J81 1249 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 ALG3Q92685 438 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 NKX2-4Q9H2Z4 354 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 MARCH2Q9P0N8 246 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 LRP2BPQ9P2M1 347 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 SIT1Q9Y3P8 196 aa7.57□□□□□ -1.2
PTPN12-211ENST00000481154 TRBV23OR9-2A0A075B6M9 112 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 B8ZZF3 427 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 SUSD5O60279 629 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 ITGAVP06756 1048 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 ASGR2P07307 311 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 BUD31P41223 144 aaPredicted RBP7.56□□□□□ -1.2
PTPN12-211ENST00000481154 TARBP2Q15633 366 aaKnown RBP7.56□□□□□ -1.2
PTPN12-211ENST00000481154 FXNQ16595 210 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 WWC2Q6AWC2 1192 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 ZNF227Q86WZ6 799 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 FRS2Q8WU20 508 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 DNAJC2Q99543 621 aaKnown RBP7.56□□□□□ -1.2
PTPN12-211ENST00000481154 CYP26B1Q9NR63 512 aa7.56□□□□□ -1.2
PTPN12-211ENST00000481154 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
PTPN12-211ENST00000481154 NTRK1P04629 796 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 PMLP29590 882 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 RAB33AQ14088 237 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 TEX2Q8IWB9 1127 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 SYT8Q8NBV8 401 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 NETO2Q8NC67 525 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 DPF3Q92784 378 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 MMP19Q99542 508 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
PTPN12-211ENST00000481154 TMEFF2Q9UIK5 374 aaPredicted RBP7.55□□□□□ -1.2
PTPN12-211ENST00000481154 A0A0G2JLL6 359 aaPredicted RBP7.54□□□□□ -1.2
PTPN12-211ENST00000481154 ECI1P42126 302 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 CTSWP56202 376 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 FOXO4P98177 505 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 SF1Q15637 639 aaKnown RBP7.54□□□□□ -1.2
PTPN12-211ENST00000481154 PRSS53Q2L4Q9 553 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 SOGA3Q5TF21 947 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 ADGRG2Q8IZP9 1017 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 CELF2-AS1Q8N7Q2 184 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 NPLOC4Q8TAT6 608 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 PEX11GQ96HA9 241 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN12-211ENST00000481154 FAN1Q9Y2M0 1017 aa7.54□□□□□ -1.2
PTPN12-211ENST00000481154 OTOL1A6NHN0 477 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-211ENST00000481154 FFAR3O14843 346 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 GJB6O95452 261 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
PTPN12-211ENST00000481154 NCAM1P13591 858 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 CCDC103Q8IW40 242 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 TP53I13Q8NBR0 393 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-211ENST00000481154 PMFBP1Q8TBY8 1022 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 TSPAN17Q96FV3 270 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 ST7Q9NRC1 585 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 RAPGEFL1Q9UHV5 662 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 NUDT5Q9UKK9 219 aa7.53□□□□□ -1.2
PTPN12-211ENST00000481154 A0A1B0GTL3 188 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 ARNTLO00327 626 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 FPR2P25090 351 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 DDR2Q16832 855 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 FNIP1Q8TF40 1166 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 RNF38Q9H0F5 515 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 XYLT2Q9H1B5 865 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 PMF1-BGLAPU3KQ54 211 aa7.52□□□□□ -1.21
PTPN12-211ENST00000481154 C22orf46C9J442 243 aa7.51□□□□□ -1.21
PTPN12-211ENST00000481154 U2SURPO15042 1029 aaKnown RBP7.51□□□□□ -1.21
PTPN12-211ENST00000481154 SASH1O94885 1247 aa7.51□□□□□ -1.21
PTPN12-211ENST00000481154 KCNJ6P48051 423 aa7.51□□□□□ -1.21
PTPN12-211ENST00000481154 SERINC3Q13530 473 aa7.51□□□□□ -1.21
PTPN12-211ENST00000481154 FBXL7Q9UJT9 491 aa7.51□□□□□ -1.21
PTPN12-211ENST00000481154 SLC10A6Q3KNW5 377 aa7.5□□□□□ -1.21
PTPN12-211ENST00000481154 VWA3BQ502W6 1294 aa7.5□□□□□ -1.21
PTPN12-211ENST00000481154 EEPD1Q7L9B9 569 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms