RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 ALDH5A1P51649 535 aaPredicted RBP14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 BECN1Q14457 450 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 KRT40Q6A162 431 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 FCHSD1Q86WN1 690 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 SLAIN1Q8ND83 568 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 FBXO18Q8NFZ0 1043 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 NSUN6Q8TEA1 469 aaKnown RBP14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 TRIB2Q92519 343 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 IWS1Q96ST2 819 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 TINF2Q9BSI4 451 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 PXMP2Q9NR77 195 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 BIN2Q9UBW5 565 aaPredicted RBP14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
SHROOM3-205ENST00000481002 FRMPD4Q14CM0 1322 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 SYNGAP1Q96PV0 1343 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 MMP1P03956 469 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 EDNRBP24530 442 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 GRK4P32298 578 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 AP3B2Q13367 1082 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 TRIM29Q14134 588 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 ARHGEF16Q5VV41 709 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 PCDHA6Q9UN73 950 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 PCDHA8Q9Y5H6 950 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
SHROOM3-205ENST00000481002 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 B4DLN1 442 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 SNAI1O95863 264 aaPredicted RBP14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 HMGCRP04035 888 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 ELNP15502 786 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 JAKMIP3Q5VZ66 844 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 MFSD14CQ5VZR4 134 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 VSIG10LQ86VR7 867 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
SHROOM3-205ENST00000481002 HSP90AA1P07900 732 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 NR3C2P08235 984 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 EIF2AK2P19525 551 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 PDCP20941 246 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 CYP2C19P33261 490 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 KRT2P35908 639 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 FOSBP53539 338 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 PGM5Q15124 567 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 LARP1BQ659C4 914 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 RASGRP4Q8TDF6 673 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 MPHOSPH6Q99547 160 aaKnown RBP14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 EHMT1Q9H9B1 1298 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 NRBP1Q9UHY1 535 aa14.16□□□□□ -0.14
SHROOM3-205ENST00000481002 BTBD18B2RXH4 712 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 SREBF1P36956 1147 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 CACNB2Q08289 660 aaPredicted RBP14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 SAFBQ15424 915 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 STXBP2Q15833 593 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 SLC9C1Q4G0N8 1177 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 PCNX4Q63HM2 1172 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 XRRA1Q6P2D8 792 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 DIS3L2Q8IYB7 885 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 OXER1Q8TDS5 423 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 CRYGNQ8WXF5 182 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 TNFRSF25Q93038 417 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 MCOLN1Q9GZU1 580 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 BRMS1Q9HCU9 246 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 DDX49Q9Y6V7 483 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 CENPFP49454 3210 aa14.15□□□□□ -0.14
SHROOM3-205ENST00000481002 EIF3JO75822 258 aaKnown RBP14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 INHAP05111 366 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 CYP3A4P08684 503 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 CCND2P30279 289 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 UBXN2AP68543 259 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 MRPS9P82933 396 aaKnown RBP14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 PDE4DQ08499 809 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 TRIM32Q13049 653 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 NR5A1Q13285 461 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 KRT25Q7Z3Z0 450 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 IL31RAQ8NI17 732 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 SH3TC2Q8TF17 1288 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 PGBD1Q96JS3 809 aa14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 FOXP1Q9H334 677 aaPredicted RBP14.14□□□□□ -0.15
SHROOM3-205ENST00000481002 EDIL3O43854 480 aa14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 STAM2O75886 525 aa14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 ZNF865P0CJ78 1059 aaPredicted RBP14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 MYCLP12524 364 aaPredicted RBP14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 CYBAP13498 195 aa14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 SYT1P21579 422 aa14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 ANP32AP39687 249 aaKnown RBP14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
SHROOM3-205ENST00000481002 ACVR2BQ13705 512 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms