RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CUL5Q93034 780 aa23.42■■□□□ 1.34
CTSA-206ENST00000480961 GTF3C6Q969F1 213 aa23.42■■□□□ 1.34
CTSA-206ENST00000480961 ZFP91Q96JP5 570 aaPredicted RBP23.42■■□□□ 1.34
CTSA-206ENST00000480961 SMCO2A6NFE2 343 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 ADAMTS3O15072 1205 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 PTGS1P23219 599 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 EDNRBP24530 442 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 CCDC144BQ3MJ40 725 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 TMEM63BQ5T3F8 832 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 IFFO2Q5TF58 517 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 AIFM3Q96NN9 605 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 CRISPLD2Q9H0B8 497 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 MAP3K20Q9NYL2 800 aaKnown RBP23.41■■□□□ 1.34
CTSA-206ENST00000480961 VPS54Q9P1Q0 977 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 FAM184BQ9ULE4 1060 aa23.41■■□□□ 1.34
CTSA-206ENST00000480961 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.4■■□□□ 1.34
CTSA-206ENST00000480961 ADCY6O43306 1168 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 MYCNP04198 464 aaPredicted RBP23.4■■□□□ 1.34
CTSA-206ENST00000480961 MYCLP12524 364 aaPredicted RBP23.4■■□□□ 1.34
CTSA-206ENST00000480961 ADCYAP1R1P41586 468 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 ST3GAL1Q11201 340 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 TAPT1Q6NXT6 567 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 SAMD3Q8N6K7 520 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 IL31RAQ8NI17 732 aa23.4■■□□□ 1.34
CTSA-206ENST00000480961 RBM27Q9P2N5 1060 aaKnown RBP23.4■■□□□ 1.34
CTSA-206ENST00000480961 KIAA0100Q14667 2235 aaKnown RBP23.4■■□□□ 1.34
CTSA-206ENST00000480961 PIK3CDO00329 1044 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 CDKL5O76039 1030 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 CD2BP2O95400 341 aaKnown RBP23.39■■□□□ 1.33
CTSA-206ENST00000480961 NR3C2P08235 984 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 AKR1A1P14550 325 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 ADCY7P51828 1080 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 PPP1R18Q6NYC8 613 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 CCDC83Q8IWF9 413 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 MPHOSPH6Q99547 160 aaKnown RBP23.39■■□□□ 1.33
CTSA-206ENST00000480961 PDCD2LQ9BRP1 358 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 RIC8AQ9NPQ8 531 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 TMEM260Q9NX78 707 aa23.39■■□□□ 1.33
CTSA-206ENST00000480961 hCG_1984214I3L0E3 225 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 ST18O60284 1047 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 JAK2O60674 1132 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 MRPL12P52815 198 aaKnown RBP23.38■■□□□ 1.33
CTSA-206ENST00000480961 ZNF713Q8N859 430 aaPredicted RBP23.38■■□□□ 1.33
CTSA-206ENST00000480961 PGBD1Q96JS3 809 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 IWS1Q96ST2 819 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 VTA1Q9NP79 307 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 OGDHLQ9ULD0 1010 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 PLXNA1Q9UIW2 1896 aa23.38■■□□□ 1.33
CTSA-206ENST00000480961 MKI67P46013 3256 aaKnown RBP23.37■■□□□ 1.33
CTSA-206ENST00000480961 LOC102724159A0A0B4J2E5 919 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 B4DLN1 442 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 DEXIO95424 95 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 RARBP10826 455 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 IRX5P78411 483 aaPredicted RBP23.37■■□□□ 1.33
CTSA-206ENST00000480961 TNFAIP2Q03169 654 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 PGM5Q15124 567 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 PWP2Q15269 919 aaKnown RBP23.37■■□□□ 1.33
CTSA-206ENST00000480961 STXBP2Q15833 593 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 GJC2Q5T442 439 aaPredicted RBP23.37■■□□□ 1.33
CTSA-206ENST00000480961 SEPT14Q6ZU15 432 aa23.37■■□□□ 1.33
CTSA-206ENST00000480961 LCTP09848 1927 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 MYH6P13533 1939 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 MSCO60682 206 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 PGK1P00558 417 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 SMPD1P17405 629 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 NSUN7Q8NE18 718 aaKnown RBP23.36■■□□□ 1.33
CTSA-206ENST00000480961 DIS3LQ8TF46 1054 aaKnown RBP23.36■■□□□ 1.33
CTSA-206ENST00000480961 ZSCAN31Q96LW9 406 aaPredicted RBP23.36■■□□□ 1.33
CTSA-206ENST00000480961 XPNPEP3Q9NQH7 507 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 GJB4Q9NTQ9 266 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 ORC3Q9UBD5 711 aaPredicted RBP23.36■■□□□ 1.33
CTSA-206ENST00000480961 PCDHA6Q9UN73 950 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 PCDHA8Q9Y5H6 950 aa23.36■■□□□ 1.33
CTSA-206ENST00000480961 FDPSP14324 419 aaKnown RBP23.35■■□□□ 1.33
CTSA-206ENST00000480961 JAKMIP3Q5VZ66 844 aa23.35■■□□□ 1.33
CTSA-206ENST00000480961 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
CTSA-206ENST00000480961 WDR11Q9BZH6 1224 aa23.35■■□□□ 1.33
CTSA-206ENST00000480961 SPDYE3A6NKU9 549 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 EIF3JO75822 258 aaKnown RBP23.34■■□□□ 1.33
CTSA-206ENST00000480961 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
CTSA-206ENST00000480961 CCND2P30279 289 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 MNX1P50219 401 aaPredicted RBP23.34■■□□□ 1.33
CTSA-206ENST00000480961 NLRP5P59047 1200 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 IQSEC1Q6DN90 963 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 RASGRP4Q8TDF6 673 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 CCDC12Q8WUD4 166 aaPredicted RBP23.34■■□□□ 1.33
CTSA-206ENST00000480961 ZMYND12Q9H0C1 365 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 C6orf50Q9HD87 102 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 RTEL1Q9NZ71 1219 aa23.34■■□□□ 1.33
CTSA-206ENST00000480961 FOSBP53539 338 aa23.33■■□□□ 1.33
CTSA-206ENST00000480961 COPS5Q92905 334 aa23.33■■□□□ 1.33
CTSA-206ENST00000480961 PAWRQ96IZ0 340 aaKnown RBP23.33■■□□□ 1.33
CTSA-206ENST00000480961 KCNJ14Q9UNX9 436 aa23.33■■□□□ 1.33
CTSA-206ENST00000480961 STK36Q9NRP7 1315 aa23.33■■□□□ 1.32
CTSA-206ENST00000480961 RBM47A0AV96 593 aaKnown RBP23.32■■□□□ 1.32
CTSA-206ENST00000480961 ESYT2A0FGR8 921 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 MYADML2A6NDP7 307 aa23.32■■□□□ 1.32
CTSA-206ENST00000480961 DYNC1LI2O43237 492 aaPredicted RBP23.32■■□□□ 1.32
CTSA-206ENST00000480961 DUSP11O75319 330 aaKnown RBP23.32■■□□□ 1.32
CTSA-206ENST00000480961 RGS20O76081 388 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms